Evidence map›Paper›PMID 40724306›Full record

ArticleFoods (Basel, Switzerland)2025

Function and Engineering of a Food Enzyme Under Coupled High-Temperature-Pressure Conditions: Insights from Molecular Dynamics Simulation and Experimental Validation.

Zidan Liu, Weihao Long, Keying Chen, Linyu Luo, Qiong Li, Tolbert Osire, Nan Zheng, Mengfei Long

Abstract read
In one paragraph

Article in Foods (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zidan LiuCollege of Pharmaceutical Sciences, Southwest University, Chongqing 400715, China.
Weihao LongCollege of Pharmaceutical Sciences, Southwest University, Chongqing 400715, China.
Keying ChenCollege of Pharmaceutical Sciences, Southwest University, Chongqing 400715, China.
Linyu LuoCollege of Pharmaceutical Sciences, Southwest University, Chongqing 400715, China.
Qiong LiCollege of Pharmaceutical Sciences, Southwest University, Chongqing 400715, China.
Tolbert OsireFaculty of Biology, Shenzhen MSU-BIT University, 1 University Park Road, Shenzhen 518172, China.
Nan ZhengKey Laboratory of Industrial Biotechnology of Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, China.
Mengfei LongCollege of Pharmaceutical Sciences, Southwest University, Chongqing 400715, China.

Funding

China Postdoctoral Science Foundation 2022M711368Fundamental Research Funds for the Central Universities JUSRP122037Fundamental Research Funds for the Central Universities SWU-KQ24009National Key Research and Development Program of China 2022YFC2105501National Natural Science Foundation of China 22408296Natural Science Foundation of Jiangsu Province, Science, and Technology Department of Jiangsu Province, China BK20221081
6 · The paper itself

Abstract

The relationship between protein structure and function is intrinsically interconnected, as the structure of a protein directly determines its functional properties. To investigate the effects of temperature and pressure on protein function, this study employed ethyl carbamate (EC) hydrolase as a model food enzyme and conducted molecular dynamics (MD) simulations under varying temperature and pressure levels to elucidate its structure-function relationship. By systematically analyzing the dynamic changes in root mean square deviation (RMSD), root mean square fluctuation (RMSF), radius of gyration (Rg), solvent accessible surface area (SASA), hydrogen bonding, catalytic pocket conformation, and packing density under different temperature and pressure conditions, we revealed the structural adaptability of EC hydrolase. Furthermore, we analyzed the characteristics of EC hydrolase using molecular dynamics simulations with temperature and pressure levels, as well as conformational bias-based computer-aided engineering, providing both theoretical and experimental foundation for the adaptability mechanisms of enzymes under extreme conditions.

Indexed as

enzyme functionethyl carbamate hydrolasemolecular dynamicspressuretemperature

Identifiers

PMID40724306
PMCPMC12294462

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.