Evidence map›Paper›PMID 40722180›Full record

ArticleVirology journal2025

Profiling HIV1-host protein-protein interaction networks in patient-derived exosome proteins: impact on pathophysiology and innate immune pathways.

Noor Fatima, Mirza Sarwar Baig, Aman Haider Rizvi, Alisha Arzoo, Manu Sharma, Md Shahadab, Aditya Arya, Ayan K Das, Vineeta Vijay Batra, Keshar Kunja Mohanty and 5 more

Abstract read
In one paragraph

Article in Virology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Noor FatimaDepartment of Molecular Medicine, School of Interdisciplinary Sciences and Technology, Jamia Hamdard, New Delhi, 110062, India.
Mirza Sarwar Baig *Centre for Virology, School of Interdisciplinary Sciences and Technology, Jamia Hamdard, New Delhi, 110062, India.
Aman Haider RizviCentre for Virology, School of Interdisciplinary Sciences and Technology, Jamia Hamdard, New Delhi, 110062, India.
Alisha ArzooCentre for Virology, School of Interdisciplinary Sciences and Technology, Jamia Hamdard, New Delhi, 110062, India.
Manu SharmaDepartment of Biotechnology, School of Chemical and Life Sciences, Jamia Hamdard, New Delhi, 110062, India.
Md ShahadabCentre for Virology, School of Interdisciplinary Sciences and Technology, Jamia Hamdard, New Delhi, 110062, India.
Aditya AryaICMR-National Institute of Malaria Research, New Delhi, 110077, India.
Ayan K DasDepartment of Microbiology, Hamdard Institute for Medical Sciences and HAH Centenary Hospital, Jamia Hamdard, New Delhi, 110062, India.
Vineeta Vijay BatraDepartment of Pathology, GB Pant Institute of Postgraduate Medical Education and Research, New Delhi, 110002, India.
Keshar Kunja MohantyImmunology Laboratory, ICMR National JALMA Institute for Leprosy and OMD, Agra, India.
Md Anzar AlamDepartment of Medicine (Moalajat), School of Unani Medical Education and Research (SUMER), Jamia Hamdard, New Delhi, 110062, India.
Ejaj AhmadCentral Molecular Laboratory, GB Pant Institute of Postgraduate Medical Education and Research, New Delhi, 110002, India.
Shakir AliDepartment of Biochemistry, Jamia Hamdard, New Delhi, 110062, India.
Angamuthu SelvapandiyanDepartment of Molecular Medicine, School of Interdisciplinary Sciences and Technology, Jamia Hamdard, New Delhi, 110062, India.
Mairaj Ahmed AnsariCentre for Virology, School of Interdisciplinary Sciences and Technology, Jamia Hamdard, New Delhi, 110062, India. drmansari@jamiahamdard.ac.in.

Funding

Ramalingaswami Fellowship, DBT, Govt. of India BT/RLF/Re-entry/15/2015
6 · The paper itself

Abstract

objectivesThe objective of this research is to investigate the pathophysiological progression of HIV from acute infection to chronic immunodeficiency (AIDS) and to understand the host's immunological responses, which are pivotal for elucidating disease aetiology and optimizing antiretroviral therapy (ART). Additionally, the study aims to explore the role of exosomes (40-130 nm bilipid-layered vesicles released by nearly all cell types) as key mediators of intercellular communication in the context of HIV infection. MATERIALS AND

methodsRecent research has uncovered that cells infected with HIV-1 release exosomes carrying a mix of viral and host components such as proteins, nucleic acids, lipids, and other metabolites. To decipher the plausible role of exosome-derived proteins in HIV disease progression, the exosomes isolated from HIV patient's serum were subjected to LC-MS/MS analysis to identify exosome-derived human and viral protein sequences. The identified proteins were then investigated, annotated, and explored for protein-protein interaction (PPI) network between HIV and the human host's proteins. Earlier experimental efforts focused on identifying PPI networks in host cells or only within the virus.

resultsThe analysis showed that out of twelve exosome-derived host proteins identified from HIV-1 patient's samples, only five of the proteins were associated with Toll-like receptors (TLR), inflammasome-activation, inhibition of apoptosis, innate immune response modulation, and autophagy pathways. In the TLR pathway, CDH5, ENO1, OGT, TJP1, and TRAF6 exosome-derived host proteins participated in regulation. Notably, CDH5, ENO1, OGT, and TRAF6 were shared among these pathways, BioGRID version 4.4 showed that HIV-1 Gag, Gag-pol, Env, and Nef proteins interact with 196, 162, 158, and 80 human proteins, respectively, associated with different innate immune response pathways.

conclusionThese findings are a step ahead in comprehending the pathophysiology of HIV1 and the innate immune response pathways, providing excellent opportunities to explore further exosome-based biomarkers for theranostic approaches.

Indexed as

ExosomesHIV-1HIV InfectionsHost-Pathogen InteractionsImmunity, InnateProtein Interaction MapsHumansTandem Mass SpectrometryBioGRID version 4.4ExosomesHuman immunodeficiency virus type-1Inflammasome activationInnate immune responseProtein–protein interactionsSIGNOR version 3.0

Identifiers

PMID40722180
PMCPMC12302467

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.