Evidence map›Paper›PMID 40718677›Full record

ArticleFrontiers in fungal biology2025

Lignocellulose adaptation drives polysaccharide biosynthesis in

Yingyin Xu, Qian Dong, Shilin Zhang, Liyuan Xie, Qian Zhang, Xueqin Shu, Jie Zhou, Weihong Peng

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in fungal biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yingyin XuNational-Local Joint Engineering Laboratory of Breeding and Cultivation of Edible and Medicinal Fungi, Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu, Sichuan, China.
Qian DongNational-Local Joint Engineering Laboratory of Breeding and Cultivation of Edible and Medicinal Fungi, Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu, Sichuan, China.
Shilin ZhangNational-Local Joint Engineering Laboratory of Breeding and Cultivation of Edible and Medicinal Fungi, Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu, Sichuan, China.
Liyuan XieNational-Local Joint Engineering Laboratory of Breeding and Cultivation of Edible and Medicinal Fungi, Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu, Sichuan, China.
Qian ZhangNational-Local Joint Engineering Laboratory of Breeding and Cultivation of Edible and Medicinal Fungi, Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu, Sichuan, China.
Xueqin ShuNational-Local Joint Engineering Laboratory of Breeding and Cultivation of Edible and Medicinal Fungi, Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu, Sichuan, China.
Jie ZhouNational-Local Joint Engineering Laboratory of Breeding and Cultivation of Edible and Medicinal Fungi, Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu, Sichuan, China.
Weihong PengNational-Local Joint Engineering Laboratory of Breeding and Cultivation of Edible and Medicinal Fungi, Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu, Sichuan, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background/Objectives: Methods: Metabolomics and proteomics were used to assess the effects of lignocellulose (consisting of cellulose, hemicellulose, and lignin) in different growth substrates on the polysaccharide content of Results: TY3 had a higher lignocellulose content than TF1. The metabolites of carbohydrates and carbohydrate conjugates in TY3-grown specimens were significantly upregulated. Among the 21 identified metabolic pathways with enriched proteins, carbohydrate metabolism was the most enriched. The Carbohydrate-Active Enzyme (CAZyme) database was used to annotate 161 carbohydrate enzymes, and 67 of them were differentially expressed proteins. Carbohydrate synthetases were upregulated much more using TY3. Conclusions:

Indexed as

CAZymelignocellulose in growth substratesmetabolomic and proteomic insightspolysaccharide contentTremella fuciformis

Identifiers

PMID40718677
PMCPMC12289600

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.