Evidence map›Paper›PMID 40718645›Full record

ArticleNeuro-oncology advances

Interpretable artificial intelligence based determination of glioma IDH mutation status directly from histology slides.

Shubham Innani, W Robert Bell, Hannah Harmsen, MacLean P Nasrallah, Bhakti Baheti, Spyridon Bakas

Abstract read
In one paragraph

Article in Neuro-oncology advances. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shubham InnaniDepartment of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, Indiana, USA.ORCID https://orcid.org/0000-0003-3616-0308
W Robert BellIndiana University Melvin and Bren Simon Comprehensive Cancer Center, Indianapolis, Indiana, USA.
Hannah HarmsenIndiana University Melvin and Bren Simon Comprehensive Cancer Center, Indianapolis, Indiana, USA.
MacLean P NasrallahDepartment of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID https://orcid.org/0000-0003-4861-0898
Bhakti BahetiDepartment of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, Indiana, USA.ORCID https://orcid.org/0000-0001-5475-3903
Spyridon BakasDepartment of Computer Science, Luddy School of Informatics, Computing, and Engineering, Indiana University, Indianapolis, Indiana, USA.ORCID https://orcid.org/0000-0001-8734-6482

Funding

The Federated Tumor Segmentation (FeTS) platform: An intuitive tool facilitating secure multi-institutional collaborationU01CA242871 · NCI · UNIVERSITY OF PENNSYLVANIA · PI BAKAS, SPYRIDON · 2019 to 2021
$1.1M
NCI NIH HHS U01 CA242871
6 · The paper itself

Abstract

Background: Isocitrate dehydrogenase (IDH) mutation status is a diagnostic requirement for glioma with associated prognostic and therapeutic implications. Clinical routine visual assessment of tissue is insufficient to determine IDH status conclusively, mandating molecular workup that is unavailable everywhere. Methods: We developed an interpretable Artificial Intelligence (AI)-based approach for determining IDH status directly from H&E-stained glioma slides. Our study is based on 2442 multi-institutional whole slide images (WSIs) from 3 independent retrospective glioma collections, following their reclassification according to the WHO 2021 criteria: (1) TCGA-GBM/TCGA-LGG ( Results: Our approach yields AUC Conclusions: Accurate H&E-based determination of glioma IDH mutation status can expedite conclusive diagnosis and clinical decision-making and even facilitate it in underserved regions. Finally, interpretability analysis of distilled human-identifiable features can further improve our understanding of the disease.

Indexed as

AIgliomashistologyIDHinterpretability

Identifiers

PMID40718645
PMCPMC12290450

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.