Evidence map›Paper›PMID 40715440›Full record

ArticleNature cell biology2025

Reconstitution of BNIP3/NIX-mitophagy initiation reveals hierarchical flexibility of the autophagy machinery.

Elias Adriaenssens, Stefan Schaar, Annan S I Cook, Jan F M Stuke, Justyna Sawa-Makarska, Thanh Ngoc Nguyen, Xuefeng Ren, Martina Schuschnig, Julia Romanov, Grace Khuu and 5 more

Abstract read
In one paragraph

Article in Nature cell biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Regulation and roles of mammalian mitophagy.Nature reviews. Molecular cell biology · 2026
    Review
  7. Article
  8. Camelliasaponin B1, a Saponin fromAntioxidants (Basel, Switzerland) · 2026
    Article
  9. Article
  10. Review
  11. The Human Autophagy Core Complexes.Annual review of biochemistry · 2026
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Core principles of autophagy initiation mechanisms.Nature structural & molecular biology · 2026
    Review
  18. ER membrane receptors engage core autophagy machinery to initiate ER-phagy.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Elias AdriaenssensMax Perutz Labs, Vienna Biocenter Campus (VBC), Vienna, Austria. elias.adriaenssens@univie.ac.at.ORCID http://orcid.org/0000-0001-9430-917X
Stefan SchaarMax Perutz Labs, Vienna Biocenter Campus (VBC), Vienna, Austria.ORCID http://orcid.org/0009-0009-6733-7277
Annan S I CookAligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD, USA.
Jan F M StukeDepartment of Theoretical Biophysics, Max Planck Institute of Biophysics, Frankfurt am Main, Germany.
Justyna Sawa-MakarskaMax Perutz Labs, Vienna Biocenter Campus (VBC), Vienna, Austria.ORCID http://orcid.org/0000-0002-9321-976X
Thanh Ngoc NguyenAligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD, USA.ORCID http://orcid.org/0000-0001-9698-0020
Xuefeng RenAligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD, USA.ORCID http://orcid.org/0000-0002-4822-4316
Martina SchuschnigMax Perutz Labs, Vienna Biocenter Campus (VBC), Vienna, Austria.
Julia RomanovMax Perutz Labs, Vienna Biocenter Campus (VBC), Vienna, Austria.
Grace KhuuAligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD, USA.ORCID http://orcid.org/0000-0002-2550-0605
Louise UoselisAligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD, USA.
Michael LazarouAligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD, USA.ORCID http://orcid.org/0000-0003-2150-5545
Gerhard HummerAligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD, USA.ORCID http://orcid.org/0000-0001-7768-746X
James H HurleyAligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD, USA.ORCID http://orcid.org/0000-0001-5054-5445
Sascha MartensMax Perutz Labs, Vienna Biocenter Campus (VBC), Vienna, Austria. sascha.martens@univie.ac.at.ORCID http://orcid.org/0000-0003-3786-8199

Funding

ChimeraX -- Next Generation Visualization and Analysis Software for Multiscale ModelingR01GM129325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2018 to 2025
$5.2M
NIGMS NIH HHS R01 GM129325Rebecca L. Cooper Medical Research Foundation RC20241396
6 · The paper itself

Abstract

Selective autophagy is a lysosomal degradation pathway that is critical for maintaining cellular homeostasis by disposing of harmful cellular material. Although the mechanisms by which soluble cargo receptors recruit the autophagy machinery are becoming increasingly clear, the principles governing how organelle-localized transmembrane cargo receptors initiate selective autophagy remain poorly understood. Here we demonstrate that the human transmembrane cargo receptors can initiate autophagosome biogenesis not only by recruiting the upstream FIP200/ULK1 complex but also via a WIPI-ATG13 complex. This latter pathway is employed by the BNIP3/NIX receptors to trigger mitophagy. Additionally, other transmembrane mitophagy receptors, including FUNDC1 and BCL2L13, exclusively use the FIP200/ULK1 complex, whereas FKBP8 and the ER-phagy receptor TEX264 are capable of utilizing both pathways to initiate autophagy. Our study defines the molecular rules for initiation by transmembrane cargo receptors, revealing remarkable flexibility in the assembly and activation of the autophagy machinery, with important implications for therapeutic interventions.

Indexed as

AutophagyMembrane ProteinsMitochondrial ProteinsMitophagyProto-Oncogene ProteinsTumor Suppressor ProteinsAutophagosomesAutophagy-Related Protein-1 HomologAutophagy-Related ProteinsHEK293 CellsHeLa CellsHumansIntracellular Signaling Peptides and ProteinsSignal TransductionAutophagy-Related Protein-1 HomologAutophagy-Related ProteinsBNIP3 protein, humanIntracellular Signaling Peptides and ProteinsMembrane ProteinsMitochondrial ProteinsProto-Oncogene ProteinsTumor Suppressor ProteinsULK1 protein, human

Identifiers

PMID40715440
PMCPMC12339401

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.