Evidence map›Paper›PMID 40715060›Full record

ArticleNature communications2025

Ancient allopolyploidy and specific subgenomic evolution drove the radiation of poplars and willows.

Deyan Wang, Mengmeng Li, Wenlu Yang, Kai Chen, Jiale Zhao, Lanxing Shan, Pengchuan Sun, Li Xu, Zhiqiang Lu, Yiling Li and 14 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. TwoPlant diversity · 2026
    Article
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  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Deyan Wang *Key Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Mengmeng Li *Key Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Wenlu Yang *Key Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Kai ChenKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Jiale ZhaoKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Lanxing ShanKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Pengchuan SunKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.ORCID http://orcid.org/0000-0002-8999-4894
Li XuKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Zhiqiang LuCAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, 666303, China.
Yiling LiKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.ORCID http://orcid.org/0000-0002-6407-1778
Yang ChenKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Jiaxiao XieKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Yubo WangKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Heng HuangKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Ao FengKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Xiaoning HaoKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Tiannan LuoKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Jianglin LuoKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Yuanzhong JiangKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.ORCID http://orcid.org/0000-0002-2955-6155
Quanjun HuKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.
Zhenxiang XiKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China.ORCID http://orcid.org/0000-0002-2851-5474
Jianquan LiuKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China. liujq@nwipb.ac.cn.ORCID http://orcid.org/0000-0002-4237-7418
Matthew OlsonDepartment of Biological Sciences, Texas Tech University, Lubbock, TX, USA. matt.olson@ttu.edu.ORCID http://orcid.org/0000-0002-0798-145X
Tao MaKey Laboratory of Bio-resource and Eco-environment of Ministry of Education, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, College of Life Sciences, Sichuan University, Chengdu, China. matao.yz@gmail.com.ORCID http://orcid.org/0000-0002-7094-6868

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Allopolyploidy involves the fusion of genomes from different lineages through hybridization and chromosome doubling. However, detecting early allopolyploidy events and understanding the specific subgenomic evolution that contributes to the origin of adaptive innovations for species radiation can be challenging. Here, we present genomes representing all three subfamilies of Salicaceae, a woody model clade, and collect epigenetic and transcriptomic samples. We reveal one shared ancient allopolyploidy event involving Populus, Salix and two sister genera, followed by contrasted karyotypic and subgenomic evolution. The specific evolution sets the stage for the origin of novel photoperiod responses, flowering phenology and small-hairy seeds in the highly speciose Populus and Salix compared with their species-depauperate sister genera, which may lead to their ecological adaptation and radiation. Our findings underscore the role of ancient allopolyploidization and specific subgenomic evolution in driving both innovation and species diversification at deep nodes of the plant tree of life.

Indexed as

Evolution, MolecularGenome, PlantPolyploidyPopulusSalixPhylogenyTranscriptome

Identifiers

PMID40715060
PMCPMC12297364

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.