Evidence map›Paper›PMID 40713900›Full record

ArticleHuman genomics2025

A novel LACC1 variant c.658G>A (p. Asp220Asn) in familial juvenile arthritis: identification and functional analysis.

Hiba Alblooshi, Noor Mustafa, Azeem Abdul Khalam, Anjali Bharathan, Ekhlass Mohammed, Ibrahim Baydoun, Mohammed Tabouni, Mushal Allam, Meera Almansoori, Tabeer Fatima and 1 more

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Article in Human genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

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0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Response to Letter to the Editor.Human genomics · 2026
    Article
  2. Article
  3. Article
  4. The research progress of LACC1.Frontiers in immunology · 2025
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Hiba AlblooshiDepartment of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain, United Arab Emirates.ORCID http://orcid.org/0000-0002-9229-8726
Noor MustafaDepartment of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain, United Arab Emirates.ORCID http://orcid.org/0000-0002-5264-302X
Azeem Abdul KhalamDepartment of Pediatrics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain, United Arab Emirates.ORCID http://orcid.org/0000-0003-1014-6129
Anjali BharathanDepartment of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain, United Arab Emirates.ORCID http://orcid.org/0009-0002-0942-1840
Ekhlass MohammedDepartment of Pediatrics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain, United Arab Emirates.
Ibrahim BaydounDepartment of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain, United Arab Emirates.ORCID http://orcid.org/0009-0009-0285-8733
Mohammed TabouniDepartment of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain, United Arab Emirates.
Mushal AllamDepartment of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain, United Arab Emirates.
Meera AlmansooriDepartment of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain, United Arab Emirates.
Tabeer FatimaDepartment of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain, United Arab Emirates.
Najla AljaberiDepartment of Pediatrics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain, United Arab Emirates. najla.aljaberi@uaeu.ac.ae.ORCID https://orcid.org/0000-0002-1390-7934

Funding

United Arab Emirates University 12M135
6 · The paper itself

Abstract

backgroundJuvenile Idiopathic Arthritis (JIA) represents the most prevalent chronic rheumatic disease in childhood. Its etiology is multifactorial, with growing evidence pointing to a significant genetic contribution to disease susceptibility. Recent genomic studies have identified a range of inherited variants associated with distinct arthritis phenotypes, among which LACC1-related arthritis has emerged as a notable contributor, particularly in familial cases with variable clinical presentations. In this study, we report the clinical and genetic characterization of a novel LACC1 c.658G>A (p. Asp220Asn) variant identified in multiple affected individuals within a large consanguineous extended family, providing further insights into the genetic underpinnings of familial juvenile arthritis.

methodswhole exome sequencing (WES) was performed on affected patients and findings were confirmed using sanger sequencing in family members. In-silico protein modeling was performed for model evaluation and visualization. LACC1 protein expression was measured in isolated and differentiated macrophages from selected patients and their carrier relatives. Allele frequency of LACC1 variants were analyzed in available in-house datasets.

resultsFour affected patients with non-systemic seronegative juvenile arthritis of different severities were found to have a novel homozygous mutation in LACC1 c.658G>A (p. Asp220Asn). Parents of affected patients were all heterozygous carriers. LACC1 protein expression showed variability, but it was markedly reduced in the index patient with the most severe phenotype. Analysis of allele frequency of other LACC1 variants showed equivalent distribution in both JIA and non-JIA genetic datasets.

conclusionCharacterizing the molecular mechanisms of LACC1-related arthritis may refine the biological taxonomy of JIA. This work contributes to the understanding of monogenic juvenile arthritis forms and supports the integration of LACC1 testing into the diagnostic approach for familial or atypical cases.

Indexed as

Arthritis, JuvenileGenetic Predisposition to DiseaseAdolescentChildChild, PreschoolExome SequencingFemaleGene FrequencyHumansIntracellular Signaling Peptides and ProteinsMaleMutationPedigreePhenotypeIntracellular Signaling Peptides and ProteinsLACC1 protein, humanAutoimmune diseaseFamilial arthritisFAMINGeneticsGenomicsJuvenile arthritisLACC1Missense variantWhole-exome sequencing

Identifiers

PMID40713900
PMCPMC12297826

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.