Evidence map›Paper›PMID 40711877›Full record

ArticleCell reports2025

Cryo-EM and cryo-ET reveal the molecular architecture and host interactions of mycobacteriophage Douge.

Jitendra Maharana, Chun-Hsiung Wang, Li-An Tsai, Yi-Ting Liao, Cheng-Han Yang, Melvin C Shen, Lourriel S Macale, Thang Ngoc Tran, Joemark Narsico, Ronelito J Perez and 11 more

Abstract read
In one paragraph

Article in Cell reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. All the world's a phage.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Jitendra MaharanaInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan; Taiwan International Graduate Program in Chemical Biology and Molecular Biophysics (TIGP-CBMB), Academia Sinica, Taipei, Taiwan; Institute of Bioinformatics and Structural Biology, College of Life Sciences and Medicine, National Tsing Hua University, Hsinchu, Taiwan.
Chun-Hsiung WangInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Li-An TsaiInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Yi-Ting LiaoInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Cheng-Han YangInstitute of Oral Medicine, National Cheng Kung University, Tainan, Taiwan.
Melvin C ShenInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Lourriel S MacaleInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Thang Ngoc TranInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Joemark NarsicoInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Ronelito J PerezInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Sunil Kumar TewaryInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Jian-Li WuInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Hong-You LinDepartment of Civil Engineering, College of Engineering, National Taiwan University, Taipei, Taiwan.
Shu-Wei ChangDepartment of Civil Engineering, College of Engineering, National Taiwan University, Taipei, Taiwan; Department of Biomedical Engineering, College of Engineering, National Taiwan University, Taipei, Taiwan.
Aaron FranklinSchool of Biosciences, University of Birmingham, Birmingham, UK.
Patrick J MoynihanSchool of Biosciences, University of Birmingham, Birmingham, UK.
Deborah Jacobs-SeraDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA.
Krista G FreemanDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA.
Graham F HatfullDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA.
Todd L LowaryInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan; Institute of Biochemical Sciences, National Taiwan University, Taipei, Taiwan.
Meng-Chiao HoInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan; Institute of Biochemical Sciences, National Taiwan University, Taipei, Taiwan. Electronic address: joeho@gate.sinica.edu.tw.

Funding

Bacteriophage diversity, dynamics, function, and exploitationR35GM131729 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Graham F. Hatfull · 2019 to 2026
$3.6M
Improving phage-based medicine with immunoengineeringK99AI173544 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI FREEMAN, KRISTA GABRIELLE · 2023 to 2024
$200k
NIAID NIH HHS K99 AI173544NIGMS NIH HHS R35 GM131729
6 · The paper itself

Abstract

Recent reports highlight the efficacy of engineered mycobacteriophages to treat non-tuberculosis mycobacterial disease. Molecular insights into mycobacteriophage architecture and host interactions could allow structure-guided phage engineering to increase efficacy and broaden host range, but such information is currently unavailable. We describe the cryoelectron microscopy (cryo-EM) structure of mycobacteriophage Douge, which contains 1,105 protein subunits assembled into a complete siphophage and is coated with glycan-binding domains for mycobacterial cell surface interactions. When filled with viral genome, the channel spanning the connector, tail, and baseplate is sealed by tape measure proteins, providing a genome gating system and requiring limited structural changes for genome ejection upon phage-host contact. Nanometer-resolution cryoelectron tomography (cryo-ET) snapshots of phage-host interactions show that the baseplate remains attached to the mycobacterial outer membrane during viral genome ejection. This study reveals high-resolution structural details of this mycobacteriophage and its interaction with host glycans.

Indexed as

Cryoelectron MicroscopyMycobacteriophagesGenome, ViralMycobacterium smegmatisViral ProteinsViral ProteinsCP: MicrobiologyCP: Molecular biologycryo-EMcryo-ETlipoarabinomannan/arabinomannanmycobacteriophage structurephage-host interaction

Identifiers

PMID40711877
PMCPMC13033339

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.