Evidence map›Paper›PMID 40710361›Full record

ArticleCells2025

A High-Throughput ImmunoHistoFluorescence (IHF) Method for Sub-Nuclear Protein Analysis in Tissue.

Kezia Catharina Oxe, Kristoffer Staal Rohrberg, Ulrik Lassen, Dorthe Helena Larsen

Abstract read
In one paragraph

Article in Cells, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kezia Catharina OxeNucleolar Stress and Disease Group, Danish Cancer Institute, Danish Cancer Society, 2100 Copenhagen, Denmark.ORCID 0000-0002-4921-4750
Kristoffer Staal RohrbergDepartment of Oncology, Rigshospitalet University Hospital of Copenhagen, 2100 Copenhagen, Denmark.ORCID 0000-0002-5448-9003
Ulrik LassenDepartment of Oncology, Rigshospitalet University Hospital of Copenhagen, 2100 Copenhagen, Denmark.ORCID 0000-0002-3865-4574
Dorthe Helena LarsenNucleolar Stress and Disease Group, Danish Cancer Institute, Danish Cancer Society, 2100 Copenhagen, Denmark.ORCID 0000-0002-8280-1252

Funding

Danish Cancer Society R302-A17506Danmarks Frie Forskningsfond 8045-00057
6 · The paper itself

Abstract

The current understanding of cellular protein distribution in clinical samples is limited. This is partially due to the complexity and heterogeneity of tissues combined with the qualitative nature of analysis by immunohistochemistry (IHC). The common use of manual assessment in the clinic is time-consuming and restricts both the complexity of scoring and the scale of patient tissue analysis. This has limited the transfer of biological observations into pathology and their integration into diagnostics. Immunofluorescence (IF) techniques allow detailed and high-throughput investigation of proteins in cell models, but their application to tissues has been hindered by poor antibody penetration, autofluorescence artefacts, and weak signals. With a growing focus on precision medicine, scalable techniques to investigate and analyse proteins are critically important. To address this, we generated a high-throughput ImmunoHistoFluorescence (IHF) approach, applying IF to tissue samples followed by automated acquisition and artificial intelligence (AI)-based analysis of sub-nuclear protein distribution to enable precise investigation of complex protein localization patterns. This advancement offers a method to transfer in vitro findings into human tissues to analyse protein localization patterns in physiologically relevant contexts for improved understanding of disease-driving mechanisms in patients, identification of new biomarkers, and acceleration of translational research.

Indexed as

Fluorescent Antibody TechniqueHigh-Throughput Screening AssaysImmunohistochemistryNuclear ProteinsHumansNuclear ProteinsImmunoHistoFluorescencesub-nuclear protein analysistissue analysis

Identifiers

PMID40710361
PMCPMC12293571

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.