Evidence map›Paper›PMID 40709915›Full record

ArticleMicrobial genomics2025

Chuhan Qin, Patrick Lypaczewski, Md Abu Sayeed, Aline Cuénod, Lindsey Brinkley, Ashton Creasy-Marrazzo, Emilee T Cato, Kamrul Islam, Md Imam Ul Khabir, Md Taufiqur R Bhuiyan and 8 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbial genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Genome-wide investigation of outbreak-associatedFrontiers in microbiology · 2026
    Article
  4. Defence systems encoded by core genomic islands of seventh pandemicPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
4 · The record

Corrections and comments

  • Update of
    2024
5 · Who and what money

Authors and funding

18 authors.

Chuhan QinDepartment of Microbiology & Immunology, McGill University, Montréal, Canada.
Patrick LypaczewskiDepartment of Microbiology & Immunology, McGill University, Montréal, Canada.
Md Abu SayeedDepartments of Pediatrics and Environmental and Global Health, Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA.
Aline CuénodDepartment of Microbiology & Immunology, McGill University, Montréal, Canada.
Lindsey BrinkleyDepartments of Pediatrics and Environmental and Global Health, Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA.
Ashton Creasy-MarrazzoDepartments of Pediatrics and Environmental and Global Health, Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA.
Emilee T CatoDepartments of Pediatrics and Environmental and Global Health, Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA.
Kamrul IslamInfectious Diseases Division (IDD), International Centre for Diarrhoeal Disease Research, Bangladesh (icddr, b), Dhaka, Bangladesh.
Md Imam Ul KhabirAlabama State University, Montgomery, AL, USA.
Md Taufiqur R BhuiyanInfectious Diseases Division (IDD), International Centre for Diarrhoeal Disease Research, Bangladesh (icddr, b), Dhaka, Bangladesh.
Yasmin BegumInfectious Diseases Division (IDD), International Centre for Diarrhoeal Disease Research, Bangladesh (icddr, b), Dhaka, Bangladesh.
Manasi N KamatDepartment of Chemistry, University of Florida, Gainesville, FL, USA.
Laura S BaileyDepartment of Chemistry, University of Florida, Gainesville, FL, USA.
Kari B BassoDepartment of Chemistry, University of Florida, Gainesville, FL, USA.
Firdausi QadriInfectious Diseases Division (IDD), International Centre for Diarrhoeal Disease Research, Bangladesh (icddr, b), Dhaka, Bangladesh.
Ashraful I KhanInfectious Diseases Division (IDD), International Centre for Diarrhoeal Disease Research, Bangladesh (icddr, b), Dhaka, Bangladesh.
Eric J NelsonDepartments of Pediatrics and Environmental and Global Health, Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA.
B Jesse ShapiroDepartment of Microbiology & Immunology, McGill University, Montréal, Canada.

Funding

Acquisition of a Q Exactive HF Hybrid Quadrupole-OrbitrapS10OD021758 · OD · UNIVERSITY OF FLORIDA · PI BASSO, KARI B · 2017 to 2017
$600k
The evaluation of a mHealth platform for diarrheal disease decision support and real-time epidemiologyR21TW010182 · FIC · UNIVERSITY OF FLORIDA · PI KHAN, ASHRAFUL ISLAM, NELSON, ERIC JORGE · 2016 to 2017
$320k
FIC NIH HHS R21 TW010182NIH HHS S10 OD021758Wellcome Trust
6 · The paper itself

Abstract

Cholera is an acute diarrhoeal disease caused by

Indexed as

CholeraGenome, BacterialVibrio choleraeBangladeshDisease OutbreaksGenetic VariationHumansPhylogenyWhole Genome Sequencingantimicrobial resistancebacteriophagecholeralong-read sequencingpangenomephylogeneticsVibrio cholerae

Identifiers

PMID40709915
PMCPMC12452190

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.