Evidence map›Paper›PMID 40709765›Full record

ArticleJournal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research2025

Inhibition of histone deacetylase 3 in dental mesenchyme regulates the development of tooth root.

Kunimichi Niibe, Dana L Begun, Kanna Doi-Fujimura, Atsuhiro Nagasaki, Elizabeth Zars, Xiaodong Li, Earnest L Taylor, Mary B MacDougall, Hiroshi Egusa, Jennifer J Westendorf

Abstract read
In one paragraph

Article in Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Loss of Stat3 in Prx1Advanced biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Kunimichi NiibeDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, MN 55905, United States.ORCID 0000-0003-1112-8475
Dana L BegunDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, MN 55905, United States.
Kanna Doi-FujimuraDivision of Molecular and Regenerative Prosthodontics, Tohoku University Graduate School of Dentistry, Sendai, Miyagi, 980-8575, Japan.
Atsuhiro NagasakiDivision of Molecular and Regenerative Prosthodontics, Tohoku University Graduate School of Dentistry, Sendai, Miyagi, 980-8575, Japan.
Elizabeth ZarsDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, MN 55905, United States.
Xiaodong LiDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, MN 55905, United States.
Earnest L TaylorDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, MN 55905, United States.
Mary B MacDougallDepartment of Oral Biological and Medical Sciences, Faculty of Dentistry, The University of British Columbia, Vancouver, BC V6T 1Z3, Canada.
Hiroshi EgusaDivision of Molecular and Regenerative Prosthodontics, Tohoku University Graduate School of Dentistry, Sendai, Miyagi, 980-8575, Japan.
Jennifer J WestendorfDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, MN 55905, United States.

Funding

Fund for the Promotion of Joint International Research 17KK0182Japan Science and Technology AgencyJapan Society for the Promotion of Science, Forest Program JPMJFR2210Mayo Clinic FoundationNIH HHS T32056950Scientific Research 19K10220
6 · The paper itself

Abstract

Studies on human and animal models have demonstrated a complex molecular regulatory network between the dental mesenchyme and epithelium governing tooth development. However, epigenetic regulation of tooth development is largely unexplored. This study aimed to elucidate the relationship between epigenetic modifiers and dental root development using mice deficient in histone deacetylase 3 (Hdac3) under the control of the osterix promoter (Osx-Cre/Hdac3fl/fl or Hdac3-CKOosx). We observed tooth root size and histology in Hdac3-CKOosx mice. Dental pulp progenitor cells (DPCs) were isolated from lower incisors, and calcification and gene expression were assessed. Hdac3 depletion in osterix-expressing dental pulp stem cells, including odontoblasts, caused a progressive postnatal obstruction, resulting in relatively short roots and small root apices of the first molar. Mild degeneration was observed during the development of dentin and cementum structures. Dentin and cementum had uneven borders and showed disordered H&E staining in Hdac3-CKOosx mice that had a thin cementum compared to that of WT mice. Hdac3 inhibition/deletion in dental pulp stem cells probably influenced Msh homeobox 1 (Msx1) and Col1a1 expression in the early developmental stage, thereby driving differentiation in DPCs. Subsequently, Msx1, Col1a1, and osteocalcin expression were remarkably downregulated during calcification. Deletion or inhibition of Hdac3 in conditional KO dental pulp stem cells cultured in mineralization medium resulted in aberrant cell cycle control, and the early stages of maturation of DPCs and odontoblasts were inhibited. Inhibition of Hdac3 in cementocytes also restricted their proliferation and calcification. These results suggested that the deletion or inhibition of Hdac3 in the dental mesenchyme may cause development and maturation deficiency of tooth root.

Indexed as

Histone Deacetylase InhibitorsHistone DeacetylasesMesodermTooth RootAnimalsDental PulpHistone Deacetylase 3MiceMice, KnockoutMSX1 Transcription FactorOdontogenesisSp7 Transcription FactorStem CellsHistone Deacetylase 3Histone Deacetylase InhibitorsHistone DeacetylasesMSX1 Transcription FactorSp7 Transcription Factordental pulpepigenetic processhistone deacetylase inhibitorsosterixstem cells

Identifiers

PMID40709765
PMCPMC12487778

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.