Evidence map›Paper›PMID 40709510›Full record

ArticleAlzheimer's & dementia : the journal of the Alzheimer's Association2025

Frontal cortex pyramidal neuron expression profiles differentiate the prodromal stage from progressive degeneration across the Alzheimer's disease spectrum.

Amanda Labuza, Melissa J Alldred, Harshitha Pidikiti, Michael H Malek-Ahmadi, Sang Han Lee, Adriana Heguy, Paul D Coleman, Souparna Chakrabarty, Gabriela Chiosis, Elliott J Mufson and 1 more

Abstract read
In one paragraph

Article in Alzheimer's & dementia : the journal of the Alzheimer's Association, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Amanda LabuzaCenter for Dementia Research, Nathan Kline Institute, Orangeburg, New York, USA.
Melissa J AlldredCenter for Dementia Research, Nathan Kline Institute, Orangeburg, New York, USA.
Harshitha PidikitiCenter for Dementia Research, Nathan Kline Institute, Orangeburg, New York, USA.
Michael H Malek-AhmadiBanner Alzheimer's Institute, Phoenix, Arizona, USA.
Sang Han LeeCenter for Dementia Research, Nathan Kline Institute, Orangeburg, New York, USA.
Adriana HeguyGenome Technology Center, New York University Grossman School of Medicine, New York, New York, USA.
Paul D ColemanASU-Banner Neurodegenerative Disease Research Center, Arizona State University, Tempe, Arizona, USA.
Souparna ChakrabartyChemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Gabriela ChiosisChemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Elliott J MufsonDepartment of Translational Neuroscience, Barrow Neurological Institute, Phoenix, Arizona, USA.
Stephen D GinsbergCenter for Dementia Research, Nathan Kline Institute, Orangeburg, New York, USA.ORCID 0000-0002-1797-4288

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
TAU, AB, SYNUCLEIN AND NITRATIVE/OXIDATIVE DAMAGE IN MCIP01AG014449 · NIA · UNIVERSITY OF PITTSBURGH · PI MUFSON, ELLIOTT JAY · 1997 to 2024
$39.7M
Impact of sex differences on the trajectory of interactome dysfunctions across the AD spectrumR01AG074004 · NIA · SLOAN-KETTERING INST CAN RESEARCH · PI CHIOSIS, GABRIELA, GINSBERG, STEPHEN D · 2021 to 2025
$6.0M
Selective interactome vulnerability across the Alzheimer’s disease spectrumR01AG072599 · NIA · SLOAN-KETTERING INST CAN RESEARCH · PI GABRIELA CHIOSIS, STEPHEN D GINSBERG · 2023 to 2026
$5.4M
Neuropathology and inflammation in a nonhuman primate model of insulin resistance/metabolic syndromeR01AG085572 · NIA · UNIVERSITY OF CALIFORNIA AT DAVIS · PI STEPHEN D GINSBERG, PETER J HAVEL · 2024 to 2026
$3.8M
Postdoctoral Research Training in Neurodegenerative Disorders and the Aging BrainT32AG052909 · NIA · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Helen E Scharfman, THOMAS M WISNIEWSKI · 2017 to 2026
$2.5M
Septhohippocamal connectome dysfunction in Down syndrome associated with Alzheimer’s disease pathophysiologyRF1AG077103 · NIA · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI GINSBERG, STEPHEN D, STUTZMANN, GRACE E. · 2023 to 2023
$2.5M
Selective interactome vulnerability across the Alzheimer’s disease spectrumR56AG072599 · NIA · SLOAN-KETTERING INST CAN RESEARCH · PI CHIOSIS, GABRIELA, GINSBERG, STEPHEN D · 2021 to 2021
$1.2M
NCI NIH HHS P30 CA008748NIA NIH HHS AG014449NIA NIH HHS AG052909NIA NIH HHS AG072599NIA NIH HHS AG074004NIA NIH HHS AG077103NIA NIH HHS AG085572NIA NIH HHS P01 AG014449NIA NIH HHS R01 AG072599NIA NIH HHS R01 AG074004NIA NIH HHS R01 AG085572NIA NIH HHS R56 AG072599NIA NIH HHS RF1 AG077103NIA NIH HHS T32 AG052909NIH HHS
6 · The paper itself

Abstract

introductionUnderlying causes of Alzheimer's disease (AD) remain unknown, making it imperative to identify molecular mechanisms driving the pathobiology of AD onset and progression.

methodsLaser capture microdissection was used to isolate layer III pyramidal neurons from post mortem human prefrontal cortex (Brodmann area 9). Single population RNA sequencing was conducted using tissue from subjects with no cognitive impairment (NCI), mild cognitive impairment (MCI), and AD. Differentially expressed genes (DEGs) were compared across groups.

resultsDEGs increased from prodromal (MCI vs. NCI) to progression (AD vs. MCI) to frank AD (AD vs. NCI). The majority of DEGs and pathways shared between prodromal and progression exhibited a change in the direction of dysregulation unlike pathways between progression and frank AD. DISCUSSION: Candidate genes and pathways were identified that demarcate early-stage AD onset from AD progression, providing a roadmap to study cortical cellular vulnerability and key targets for intervention at early stages of AD. HIGHLIGHTS: Pyramidal neuron differentially expressed genes (DEGs) are directionally divergent between prodromal, progression, and frank Alzheimer's disease (AD). Pyramidal neuron DEGs are directionally convergent between progression and frank AD. Dysfunctional bioenergetic pathways increased dysregulation as the AD spectrum progressed. Immune response pathways were more dysregulated in frank AD than prodromal stages. DEGs, = biological pathways, and interactomes demarcate specific stages across the AD spectrum.

Indexed as

Alzheimer DiseaseCognitive DysfunctionFrontal LobePrefrontal CortexProdromal SymptomsPyramidal CellsAgedAged, 80 and overDisease ProgressionFemaleHumansMaleAlzheimer's disease spectrumbioinformaticsfrontal cortexgene expressionmild cognitive impairmentpyramidal neuronsRNA sequencingselective vulnerability

Identifiers

PMID40709510
PMCPMC12290489

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.