Evidence map›Paper›PMID 40707455›Full record

ArticleNature communications2025

Starship giant transposons dominate plastic genomic regions in a fungal plant pathogen and drive virulence evolution.

Yukiyo Sato, Roos Bex, Grardy C M van den Berg, Parthasarathy Santhanam, Monica Höfte, Michael F Seidl, Bart P H J Thomma

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  4. Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yukiyo SatoInstitute for Plant Sciences, Department of Biology, University of Cologne, Cologne, Germany.ORCID http://orcid.org/0000-0003-4514-8482
Roos BexLaboratory of Phytopathology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0009-0003-9018-990X
Grardy C M van den BergLaboratory of Phytopathology, Wageningen University and Research, Droevendaalsesteeg 1, 6708PB, Wageningen, the Netherlands.
Parthasarathy SanthanamAgriculture and Agri-Food Canada, Morden Research and Development Centre, Morden, MB, Canada.
Monica HöfteLaboratory of Phytopathology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0002-0850-3249
Michael F SeidlTheoretical Biology & Bioinformatics Group, Department of Biology, Utrecht University, Utrecht, the Netherlands.ORCID http://orcid.org/0000-0002-5218-2083
Bart P H J ThommaInstitute for Plant Sciences, Department of Biology, University of Cologne, Cologne, Germany. bthomma@uni-koeln.de.ORCID http://orcid.org/0000-0003-4125-4181

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Starships form a recently discovered superfamily of giant transposons in Pezizomycotina fungi, implicated in mediating horizontal transfer of diverse cargo genes between fungal genomes. Their elusive nature has long obscured their significance, and their impact on genome evolution remains poorly understood. Here, we reveal a surprising abundance and diversity of Starships in the phytopathogenic fungus Verticillium dahliae. Remarkably, Starships dominate the plastic genomic compartments involved in host colonization, carry multiple virulence-associated genes, and exhibit genetic and epigenetic characteristics associated with adaptive genome evolution. Phylogenetic analyses suggest extensive horizontal transfer of Starships between Verticillium species and, strikingly, from distantly related Fusarium fungi. Finally, homology searches and phylogenetic analyses suggest that a Starship contributed to de novo virulence gene formation. Our findings illuminate the profound influence of Starship dynamics on fungal genome evolution and the development of virulence.

Indexed as

AscomycotaDNA Transposable ElementsEvolution, MolecularGenome, FungalPlant DiseasesGene Transfer, HorizontalPhylogenyVerticilliumVirulenceDNA Transposable Elements

Identifiers

PMID40707455
PMCPMC12289983

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.