Evidence map›Paper›PMID 40704999›Full record

ArticleeLife2025

Identifying genetic variations in

Masayuki Ono, Masaya Yamaguchi, Daisuke Motooka, Yujiro Hirose, Kotaro Higashi, Tomoko Sumitomo, Tohru Miyoshi-Akiyama, Rumi Okuno, Takahiro Yamaguchi, Ryuji Kawahara and 9 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in eLife, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Masayuki OnoDepartment of Microbiology, Graduate School of Dentistry, The University of Osaka, Osaka, Japan.ORCID https://orcid.org/0009-0006-9557-9669
Masaya YamaguchiDepartment of Microbiology, Graduate School of Dentistry, The University of Osaka, Osaka, Japan.ORCID https://orcid.org/0000-0001-6218-7112
Daisuke MotookaBioinformatics Center, Research Institute for Microbial Diseases, The University of Osaka, Osaka, Japan.
Yujiro HiroseDepartment of Microbiology, Graduate School of Dentistry, The University of Osaka, Osaka, Japan.ORCID https://orcid.org/0000-0001-6338-4767
Kotaro HigashiDepartment of Microbiology, Graduate School of Dentistry, The University of Osaka, Osaka, Japan.ORCID https://orcid.org/0000-0001-9529-1557
Tomoko SumitomoDepartment of Microbiology, Graduate School of Dentistry, The University of Osaka, Osaka, Japan.ORCID https://orcid.org/0000-0003-0653-0339
Tohru Miyoshi-AkiyamaPathogenic Microbe Laboratory, Department of Infectious Diseases, National Center for Global Health and Medicine, Tokyo, Japan.
Rumi OkunoDepartment of Microbiology, Tokyo Metropolitan Institute of Public Health, Tokyo, Japan.
Takahiro YamaguchiDepartment of Bacteriology, Osaka Institute of Public Health, Osaka, Japan.
Ryuji KawaharaDepartment of Bacteriology, Osaka Institute of Public Health, Osaka, Japan.
Hitoshi OtsukaDepartment of Public Health Sciences, Yamaguchi Prefectural Institute of Public Health and Environment, Yamaguchi, Japan.
Noriko NakanishiDepartment of Infectious Diseases, Kobe Institute of Health, Hyogo, Japan.
Yu KazawaFukushima Prefectural Institute for Public Health Ken-chu Branch Office, Fukushima, Japan.
Chikara NakagawaDivision of Microbiology, Kyoto City Institute of Health and Environmental Sciences, Kyoto, Japan.
Ryo YamaguchiSapporo Public Health Office, Hokkaido, Japan.
Hiroo SakaiNiigata City Institute of Public Health and the Environment, Niigata, Japan.
Yuko MatsumotoMicrobiological Testing and Research Division, Yokohama City Institute of Public Health, Kanagawa, Japan.
Tadayoshi IkebeDepartment of Bacteriology I, National Institute of Infectious Diseases, Tokyo, Japan.
Shigetada KawabataDepartment of Microbiology, Graduate School of Dentistry, The University of Osaka, Osaka, Japan.

Funding

AMED JP17fk0108044AMED JP20fk0108130AMED JP20wm0325001AMED JP243fa727001hJapan Science and Technology Agency SPRING JPMJSP2138Japan Society for the Promotion of Science 20KK0210Japan Society for the Promotion of Science 22H03262Japan Society for the Promotion of Science 22K19618Japan Society for the Promotion of Science 22K19619Japan Society for the Promotion of Science 23H03073Japan Society for the Promotion of Science 23K19687Japan Society for the Promotion of Science 24K19854Joint Research Program of the Research Center for GLOBAL and LOCAL Infectious Diseases, Oita University 2022B05Joint Research Program of the Research Center for GLOBAL and LOCAL Infectious Diseases, Oita University 2025B01Joint Research Program of the Research Center for GLOBAL and LOCAL Infectious Diseases, Oita University 2025B13Joint Usage/Research Center for Interdisciplinary Large-scale Information Infrastructures (JHPCN) EX22701Joint Usage/Research Center for Interdisciplinary Large-scale Information Infrastructures (JHPCN) jh230035Joint Usage/Research Center for Interdisciplinary Large-scale Information Infrastructures (JHPCN) jh240003Joint Usage/Research Center for Interdisciplinary Large-scale Information Infrastructures (JHPCN) jh250016
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Genetic VariationStreptococcal InfectionsStreptococcus pyogenesGenome-Wide Association StudyHumansINDEL MutationPolymorphism, Single NucleotideVirulenceferric iron transporterinfectious diseaseinvasive infectionsmicrobiologypangenome analysispangenome-wide association studyS. pyogenesStreptococcus pyogenes

Identifiers

PMID40704999
PMCPMC12289306

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.