Evidence map›Paper›PMID 40704535›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2025

Phagocytosed Photoreceptor Outer Segment Particles Within the Retinal Pigment Epithelium Show Diurnal Rhythmicity and Variation Between Cone Subtypes in Larval Zebrafish.

Jenni Partinen, Noora Emilia Nevala, Sanni Erämies, Teemu Olavi Ihalainen, Soile Nymark

Abstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jenni PartinenFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID https://orcid.org/0000-0002-4744-8633
Noora Emilia NevalaFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID https://orcid.org/0000-0001-5018-3157
Sanni ErämiesFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID https://orcid.org/0009-0002-8685-8130
Teemu Olavi IhalainenFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID https://orcid.org/0000-0003-4351-8697
Soile NymarkFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID https://orcid.org/0000-0002-9274-0123

Funding

Academy of Finland 323507Academy of Finland 323509Academy of Finland 356111Mary and Georg Ehrnrooth Foundation 202300084Silma ja kudospankkisaatio 20230001Suomen Kulttuurirahasto (SKR) 00220754Suomen Kulttuurirahasto (SKR) 00240944The Finnish Society of Sciences and Letters 20-2480-40
6 · The paper itself

Abstract

Phagocytosis of retinal rod and cone outer segment (OS) tips by the retinal pigment epithelium (RPE) occurs daily to prevent the accumulation of harmful compounds in the photoreceptors. Rhythmic bursts seen as increased numbers of phagocytosed OS particles in the RPE are known to appear once or twice a day depending on the animal species. Yet, the variation of this rhythmicity between the distinct photoreceptor types is not well understood. We used zebrafish to compare the phagosome numbers and their daily rhythms between the different cone subtypes. We immunolabeled the different cone opsins from the histological sections of the eyes of zebrafish larvae that were collected at seven different time points throughout a 24 h circadian cycle. Internalized OS particles were then quantified using confocal microscopy and image analysis. Interestingly, the results revealed the presence of OS particles of all cone subtypes in the RPE throughout the day in larval zebrafish. However, we observed a significant increase in the phagosome numbers from UV and blue cones at two time points, whereas the number of green cone OS particles was more constant, probably reflecting their more immature developmental stage. We also investigated whether the rhythmicity is regulated by external light by keeping the larvae in constant darkness before sample preparation. We found that the complete darkness condition diminished the phagosome numbers of all cone subtypes and abolished the daytime peaks in the UV and blue cones, indicating that the rhythmicity is strongly affected by the external light in the larval zebrafish. Our findings provide new understanding on the rhythmicity of cone OS phagocytosis and its regulation.

Indexed as

Circadian RhythmPhagocytosisRetinal Cone Photoreceptor CellsRetinal Photoreceptor Cell Outer SegmentRetinal Pigment EpitheliumZebrafishAnimalsLarvaPhagosomescircadian clockscone photoreceptorphagocytosisretinal photoreceptor outer segmentretinal pigment epitheliumrhythmicityzebrafish

Identifiers

PMID40704535
PMCPMC12288107

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.