Evidence map›Paper›PMID 40702373›Full record

ArticlePlanta2025

Branched-chain amino acid catabolism initiates volatile synthesis in Gentiana triflora.

Takuya Teshima, Keiichirou Nemoto, Motoki Shimizu, Chiharu Yoshida, Akiko Hirabuchi, Fumina Goto, Takashi Nakasato, Zenbi Naito, Masahiro Nishihara

Abstract read
In one paragraph

Article in Planta, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Takuya TeshimaIwate Biotechnology Research Center, 22-174-4 Narita, Kitakami, Iwate, 024-0003, Japan.
Keiichirou NemotoIwate Biotechnology Research Center, 22-174-4 Narita, Kitakami, Iwate, 024-0003, Japan.
Motoki ShimizuIwate Biotechnology Research Center, 22-174-4 Narita, Kitakami, Iwate, 024-0003, Japan.
Chiharu YoshidaIwate Biotechnology Research Center, 22-174-4 Narita, Kitakami, Iwate, 024-0003, Japan.
Akiko HirabuchiIwate Biotechnology Research Center, 22-174-4 Narita, Kitakami, Iwate, 024-0003, Japan.
Fumina GotoIwate Biotechnology Research Center, 22-174-4 Narita, Kitakami, Iwate, 024-0003, Japan.
Takashi NakasatoIwate Agricultural Research Center, 22-1 Narita, Kitakami, Iwate, 024-0003, Japan.
Zenbi NaitoIwate Agricultural Research Center, 22-1 Narita, Kitakami, Iwate, 024-0003, Japan.
Masahiro NishiharaIwate Biotechnology Research Center, 22-174-4 Narita, Kitakami, Iwate, 024-0003, Japan. mnishiha@fpu.ac.jp.ORCID http://orcid.org/0000-0002-1454-8785

Funding

Iwate Prefecture not available
6 · The paper itself

Abstract

MAIN

conclusionThis study identified GeBCAT2 as a key gene in catalyzing the first step of branched chain amino acid biosynthesis in Gentiana triflora, thereby contributing to unpleasant floral odor emission. Gentians, widely cultivated as ornamental flowers in Japan, primarily originate from the endemic gentian species Gentiana triflora and G. scabra. This study analyzed volatile compounds in Japanese gentians using gas chromatography-mass spectrometry. Results showed that G. triflora flowers consistently emitted 3-methylbutanoic acid, 2-methylbutanoic acid, and isobutyric acid, which are volatile organic compounds derived from branched-chain amino acids (BCAAs) and associated with unpleasant odors. In contrast, G. scabra flowers did not emit these compounds. Although the BCAA metabolism has been widely studied, its catabolic pathways in gentians remain unclear. Therefore, we performed precursor feeding experiments to quantitatively verify the role of BCAAs and their corresponding keto acids in producing odorous volatiles. We also cloned and functionally analyzed two Gentiana BCAAs transferase genes (GeBCAT1 and GeBCAT2). Both genes were more highly expressed in flowers than in leaves, with expression levels higher in G. triflora than in G. scabra. Enzymatic assays with recombinant proteins demonstrated that GeBCAT1 and GeBCAT2 participate in BCAA-related catabolic reactions. Notably, GeBCAT2's substrate specificity for BCAAs correlated with unpleasant odor intensity in G. triflora, suggesting that it serves as the primary enzyme initiating unpleasant odor biosynthesis in gentians. These findings provide valuable insights into volatile biosynthesis in gentians and offer a foundation for breeding cultivars with reduced unpleasant odors.

Indexed as

Amino Acids, Branched-ChainGentianaVolatile Organic CompoundsFlowersGas Chromatography-Mass SpectrometryGene Expression Regulation, PlantOdorantsPlant LeavesPlant ProteinsAmino Acids, Branched-ChainPlant ProteinsVolatile Organic Compounds3-Methylbutanoic acidBranched-chain amino acid transferaseFloral scentGentianVolatile organic compounds

Identifiers

PMID40702373
PMCPMC12287140

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.