Evidence map›Paper›PMID 40700097›Full record

ArticleMicrobiology spectrum2025

Implementation of convolutional neural networks for microbial colony recognition.

Fanhui Kong, Mingkuan Su, Jianfeng Guo, Haiying Wu, Hongbin Chen, Jie Qiu, Jiancheng Huang

Abstract read
In one paragraph

Article in Microbiology spectrum, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. [Advances in the Application of Artificial Intelligence in Clinical Microbiological Testing].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2026
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fanhui KongDepartment of Laboratory Medicine, Mindong Hospital of Ningde City, Ningde, Fujian, China.
Mingkuan SuDepartment of Laboratory Medicine, Mindong Hospital of Ningde City, Ningde, Fujian, China.ORCID 0000-0002-3419-5753
Jianfeng GuoDepartment of Laboratory Medicine, Mindong Hospital of Ningde City, Ningde, Fujian, China.
Haiying WuDepartment of Laboratory Medicine, Mindong Hospital of Ningde City, Ningde, Fujian, China.
Hongbin ChenDepartment of Laboratory Medicine, Mindong Hospital of Ningde City, Ningde, Fujian, China.
Jie QiuDepartment of Laboratory Medicine, Mindong Hospital of Ningde City, Ningde, Fujian, China.
Jiancheng HuangDepartment of Laboratory Medicine, Mindong Hospital of Ningde City, Ningde, Fujian, China.ORCID 0009-0002-5546-0023

Funding

Natural Science Foundation of Fujian Province 2021J011447
6 · The paper itself

Abstract

Initial classification of microorganisms based on visual identification of colonies remains challenging for skilled microbiologists and is influenced by the proficiency and subjective interpretation of professionals. To overcome these challenges, we applied deep learning to microbial colony recognition to provide microbial data to microbiologists to assist in clinical classification. Photographs of clinically isolated microbial colonies were captured to produce a 48 × 48 pixel colony data set, which was divided into training, validation, and test data sets. Eight convolutional neural networks (CNNs) were adapted to the colony classification task. The classification performance of the models was evaluated based on accuracy, precision, recall, and F1 score. The data set included five categories, namely gram-negative bacilli, gram-positive cocci,

Indexed as

BacteriaFungiNeural Networks, ComputerCandidaConvolutional Neural NetworksDeep LearningHumansalgorithmcolonyconvolutional neural networkdeep learningmicroorganism

Identifiers

PMID40700097
PMCPMC12403611

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.