Evidence map›Paper›PMID 40699552›Full record

ArticleVeterinary medicine and science2025

Biofilm Formation and Antibiotic Resistance Genes of Escherichia coli From Poultry Farms and Clinical Samples.

Arina Sasoon, Farhad Nikkhahi, Amir Javadi, Samira Sabzi, Mohadeseh Ostovari Deilamani, Niloofar Kiaheyrati, Amin Karampour, Amir Peymani, Fatemeh Fardsanei

Abstract read
In one paragraph

Article in Veterinary medicine and science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Deep Eutectic Solvent-Based Emulsion ContainingAntibiotics (Basel, Switzerland) · 2026
    Article
  3. Article
  4. A Lytic Bacteriophage as a Potential Biocontrol Agent Against Avian EnterotoxigenicThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Arina SasoonMedical Microbiology Research Center, Qazvin University of Medical Sciences, Qazvin, Iran.
Farhad NikkhahiMedical Microbiology Research Center, Qazvin University of Medical Sciences, Qazvin, Iran.ORCID 0000-0003-0369-8179
Amir JavadiMedical Microbiology Research Center, Qazvin University of Medical Sciences, Qazvin, Iran.
Samira SabziMedical Microbiology Research Center, Qazvin University of Medical Sciences, Qazvin, Iran.
Mohadeseh Ostovari DeilamaniMedical Microbiology Research Center, Qazvin University of Medical Sciences, Qazvin, Iran.
Niloofar KiaheyratiMedical Microbiology Research Center, Qazvin University of Medical Sciences, Qazvin, Iran.
Amin KarampourMedical Microbiology Research Center, Qazvin University of Medical Sciences, Qazvin, Iran.
Amir PeymaniMedical Microbiology Research Center, Qazvin University of Medical Sciences, Qazvin, Iran.
Fatemeh FardsaneiMedical Microbiology Research Center, Qazvin University of Medical Sciences, Qazvin, Iran.ORCID 0000-0001-5960-6056

Funding

Medical Microbiology Research Center,Qazvin university of Medical Sciences IR.QUMS.REC.1400.439
6 · The paper itself

Abstract

backgroundEscherichia coli affects human health through intestinal and extraintestinal infections. Avian pathogenic E. coli (APEC) contributes to colibacillosis in poultry and can develop public health risks. Antibiotic resistance and biofilm-producer strains are challenges in infection control options.

objectiveThis study aimed to characterize phenotypic and genotypic antibiotic resistance profiles as well as biofilm formation assay in E. coli isolates from clinical and poultry samples.

methodsIn the study, 42 E. coli isolates were collected and confirmed from clinical and poultry sources. The isolates were evaluated for pathotypes using polymerase chain reaction (PCR). Antibiotic resistance was evaluated using the disk diffusion technique and minimum inhibitory concentration (MIC) tests. PCR was utilized to identify antimicrobial resistance genes associated with fluoroquinolones, sulphonamides, tetracyclines and beta-lactams. Biofilm formation was evaluated using a 96-well microtiter plate.

resultsThree clinical isolates, including enteropathogenic E. coli (EPEC), enteroaggregative E. coli (EAEC) and enterotoxigenic E. coli (ETEC), were identified as pathogenic strains. The highest rates of resistance were recorded against tylosin (100%), neomycin (92.85%), tetracycline (85.7%), ampicillin (73.8%), doxycycline (71.4%), ciprofloxacin (64.28%), trimethoprim/sulfamethoxazole (64.28%) and enrofloxacin (57.1%). The most prevalent resistance genes detected as blaTEM and gyrA/B (97.6% and 76.1%, respectively). The overall prevalence of blaCTX, sul1, sul2, tetA and tetB genes were 21.4%, 45.2%, 11.9%, 33.3% and 7.1%, respectively. The qnrB, qnrB4 and qnrS genes were absent in the clinical samples, whereas present in poultry isolates. All isolates were biofilm producers, and 96.4% of poultry isolates had strong biofilm formation capacity.

conclusionThe alarming levels of resistance genes and biofilm formation of isolates in the present study emphasize the need for antibiotic management practices and further research on resistance transmission dynamics in the food industry.

Indexed as

Anti-Bacterial AgentsBiofilmsChickensDrug Resistance, BacterialEscherichia coliEscherichia coli InfectionsPoultry DiseasesAnimalsFarmsMicrobial Sensitivity TestsPoultryAnti-Bacterial Agentsantibiotics resistancebiofilm formationEscherichia colipoultry

Identifiers

PMID40699552
PMCPMC12285606

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.