Evidence map›Paper›PMID 40698862›Full record

ArticleBriefings in bioinformatics2025

MDNN: memetic deep neural network for genomic prediction.

Yijun Mao, Xingcheng Peng, Jian Weng, Rongjin Jiang, Yingjie Kuang, Jiasi Weng, Rui Pang, Yunyan Xiong, Wanrong Gu, Deyu Tang

Abstract read
In one paragraph

Article in Briefings in bioinformatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
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0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yijun MaoCollege of Mathematics and Informatics, South China Agricultural University, 483 Wushan Road, Tianhe District, Guangzhou 510642, China.
Xingcheng PengCollege of Mathematics and Informatics, South China Agricultural University, 483 Wushan Road, Tianhe District, Guangzhou 510642, China.ORCID 0009-0002-2651-6067
Jian WengCollege of Cyber Security, Jinan University, 601 West Huangpu Avenue, Tianhe District, GuangZhou 510632, China.
Rongjin JiangDepartment of Digital Process, Wens Foodstuff Group CO., LTD., 9 Dongdi North Road, Xinxing County, YunFu 527400, China.
Yingjie KuangCollege of Mathematics and Informatics, South China Agricultural University, 483 Wushan Road, Tianhe District, Guangzhou 510642, China.
Jiasi WengCollege of Cyber Security, Jinan University, 601 West Huangpu Avenue, Tianhe District, GuangZhou 510632, China.
Rui PangState Key Laboratory of Green Pesticide, College of Plant Protection, South China Agricultural University, 483 Wushan Road, Tianhe District, Guangzhou 510642, China.
Yunyan XiongSchool of Computer and Information Engineering, Guangdong Polytechnic of Industry and Commerce, 1098 North Guangzhou Avenue, Tianhe District, Guangzhou 510510, China.
Wanrong GuCollege of Mathematics and Informatics, South China Agricultural University, 483 Wushan Road, Tianhe District, Guangzhou 510642, China.
Deyu TangCollege of Mathematics and Informatics, South China Agricultural University, 483 Wushan Road, Tianhe District, Guangzhou 510642, China.

Funding

Guangdong University Featured Innovation Program Project 2023KTSCX256National Key Laboratory of Data Space Technology and System QZQC2024004-6National Key R&D Program of China 2021YFD1300100National Natural Science Foundation of China 61976239Research and Application of Data Elementization Security Protection Technology for Big Data Platforms 202403011
6 · The paper itself

Abstract

Genomic prediction (GP) has made significant progress in the field of breeding. Traditional linear models perform well in handling simple traits but have limitations in extracting nonlinear features for complex traits. The introduction of deep learning (DL) techniques has provided a new approach to GP, especially suited for high-dimensional data processing and complex trait prediction. However, traditional DL models require manual design of the network architecture, which necessitates continuous experimentation and modification. In this paper, we propose a new framework, MDNN, that utilizes the memetic algorithm for neural architecture search and automatically optimizes the network architecture. Compared with the DNNGP, MDNN achieved a 36.49% improvement in the average Pearson correlation coefficient on the wheat599 dataset and a 12.28% improvement on the wheat2000 dataset.

Indexed as

Deep LearningGenomicsNeural Networks, ComputerTriticumAlgorithmsdeep learninggenomic predictionmemetic algorithmneural architecture search

Identifiers

PMID40698862
PMCPMC12284770

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.