Evidence map›Paper›PMID 40697678›Full record

ArticleJournal of clinical tuberculosis and other mycobacterial diseases2025

OMNIgene.SPUTUM for transporting sputum in ambient temperature for tuberculosis testing: Bangladesh experience.

Senjuti Kabir, Sabrina Choudhury, Mohammad Khaja Mafij Uddin, M D Fahim Ather, Syed Mohammad Mazidur Rahman, Pronab Kumar Modak, Mohammad Samsuddoha Sarker Shanchay, Tanjina Rahman, Shahriar Ahmed, Sayera Banu

Abstract read
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Article in Journal of clinical tuberculosis and other mycobacterial diseases, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Senjuti KabirInfectious Diseases Division, icddr,b, Mohakhali, Dhaka, Bangladesh.
Sabrina ChoudhuryInfectious Diseases Division, icddr,b, Mohakhali, Dhaka, Bangladesh.
Mohammad Khaja Mafij UddinInfectious Diseases Division, icddr,b, Mohakhali, Dhaka, Bangladesh.
M D Fahim AtherInfectious Diseases Division, icddr,b, Mohakhali, Dhaka, Bangladesh.
Syed Mohammad Mazidur RahmanInfectious Diseases Division, icddr,b, Mohakhali, Dhaka, Bangladesh.
Pronab Kumar ModakNational Tuberculosis Control Programme, Director General of Health Services, Mohakhali, Dhaka, Bangladesh.
Mohammad Samsuddoha Sarker Shanchay300 bedded Hospital, Narayanganj, Dhaka, Bangladesh.
Tanjina RahmanInfectious Diseases Division, icddr,b, Mohakhali, Dhaka, Bangladesh.
Shahriar AhmedInfectious Diseases Division, icddr,b, Mohakhali, Dhaka, Bangladesh.
Sayera BanuInfectious Diseases Division, icddr,b, Mohakhali, Dhaka, Bangladesh.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Performance of OMNIgene.SPUTUM (OM-S) for transporting sputum was evaluated. Methods: This exploratory study was conducted during January-December 2019 at four near and one distant healthcare-facilities of Dhaka. Smear-positive pulmonary TB patients' sputa were collected, divided into 'OM-S untreated' and 'OM-S treated' portions, and transported to testing laboratory, Dhaka, on same-day from near-sites, and through courier from distant-site for smear-microscopy, culture, and Xpert MTB/RIF (Xpert) testing. Subset of 'OM-S treated' sample was tested with Xpert without centrifugation. Test results of all portions were compared in between. Results: Total 444 participants were enrolled (near-sites:198, distant-site: 246). All test results were comparable in both portions for near-sites. For distant-site, smear-microscopy's positivity was reduced by 4.1 % in 'OM-S treated', Xpert showed 100 % concordance in both portions, and culture was higher in 'OM-S treated' than 'OM-S untreated' (92.3 % vs 89.4 %; p = 0.288). Primary contamination rate in 'OM-S treated' was lower than 'OM-S untreated' (2.0 % vs 9.8 %; p < 0.05). For all sites, median (IQR) time-to-culture positivity was 35 (28, 42) days in both portions. Xpert positivity was 99 % concordant in 'OM-S treated' regardless of centrifugation. Conclusions: OM-S is safe for sputum transportation. OM-S mixed sputum can be tested with Xpert and culture. Further studies can validate findings and assess cost-effectiveness.

Indexed as

OMNIgene.SPUTUMRoom temperatureSputum transportationTuberculosis

Identifiers

PMID40697678
PMCPMC12281178

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.