Evidence map›Paper›PMID 40696421›Full record

ArticleEnvironmental microbiome2025

Shift in the metabolic profile of sediment microbial communities during seagrass decline.

Marsej Markovski, Mirjana Najdek, Zihao Zhao, Gerhard J Herndl, Marino Korlević

Abstract read
In one paragraph

Article in Environmental microbiome, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Vegetation Increases CHGlobal change biology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Marsej MarkovskiCentre for Marine Research, Ruđer Bošković Institute, G. Paliaga 5, 52210, Rovinj, Croatia.
Mirjana NajdekCentre for Marine Research, Ruđer Bošković Institute, G. Paliaga 5, 52210, Rovinj, Croatia.
Zihao ZhaoDepartment of Functional and Evolutionary Ecology, University of Vienna, Djerassiplatz 1, 1030, Vienna, Austria.
Gerhard J HerndlDepartment of Functional and Evolutionary Ecology, University of Vienna, Djerassiplatz 1, 1030, Vienna, Austria.
Marino KorlevićCentre for Marine Research, Ruđer Bošković Institute, G. Paliaga 5, 52210, Rovinj, Croatia. marino.korlevic@irb.hr.

Funding

Austrian Science Fund I 4978-BCroatian Science Foundation IP-2016-06-7118
6 · The paper itself

Abstract

backgroundSeagrass meadows are highly productive ecosystems that are considered hotspots for carbon sequestration and microbial activity. In seagrass sediments, microbial communities break down organic matter, facilitating the release and transformation of nutrients that support plant growth and primary production. The decline of seagrass meadows of various species has been documented worldwide, including that of Cymodocea nodosa (Ucria) Ascherson, a widespread seagrass in the Mediterranean Sea. To assess the influence of seagrass decline on the metabolic profile of sediment microbial communities, metaproteomes from two sites, one without vegetation and one with a declining Cymodocea nodosa meadow, were characterised at monthly intervals from July 2017 to October 2018.

resultsPrior to seagrass decline, differences in the metabolic profiles between the vegetated and nonvegetated sediment were found, particularly in the deeper sediment layers. During the decline, these differences diminished as microbial communities in nonvegetated sediments exhibited increased protein richness and diversity, aligning more closely with those at the vegetated site. Notably, temporal variations in the structure of the metabolic profile were only observable in the nonvegetated sediment and were also more pronounced at greater sediment depths. Finally, the assessment of proteins involved in organic matter degradation such as ABC transporters, fermentation-mediating enzymes, and proteins involved in dissimilatory sulphate reduction mirrored these shifts.

conclusionsOverall, the main results of this study suggest that the presence of seagrass meadows influences the metabolic profile of microbial communities in sediments, highlighting the distinctions between nonvegetated and seagrass-colonised sediments. In particular, the loss of seagrass leads to a shift in the metabolic profile of sediment communities in the surrounding area, while the metabolic profiles of previously colonised sediments appear to be more resilient to seagrass loss.

Indexed as

Cymodocea nodosaMetaproteomicsMicrobial metabolic profileNorthern Adriatic SeaSeagrass meadow declineSediment microbial communities

Identifiers

PMID40696421
PMCPMC12281803

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.