Evidence map›Paper›PMID 40695817›Full record

ArticleNature communications2025

Protein design of two-component tubular assemblies similar to cytoskeletons.

Masahiro Noji, Yukihiko Sugita, Yosuke Yamazaki, Makito Miyazaki, Yuta Suzuki

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Masahiro NojiResearch Fellow of Japan Society for the Promotion of Science, Tokyo, Japan.ORCID https://orcid.org/0000-0002-9707-035X
Yukihiko SugitaInstitute for Life and Medical Sciences, Kyoto University, Kyoto, Japan.ORCID http://orcid.org/0000-0001-6861-4840
Yosuke YamazakiGraduate School of Science, Kyoto University, Kyoto, Japan.ORCID http://orcid.org/0000-0002-6863-3344
Makito MiyazakiHakubi Center for Advanced Research, Kyoto University, Kyoto, Japan.ORCID http://orcid.org/0000-0002-4603-851X
Yuta SuzukiInstitute for Integrated Cell-Material Sciences, Kyoto University, Kyoto, Japan. suzuki.yuta.2m@kyoto-u.ac.jp.ORCID http://orcid.org/0000-0002-4863-4585

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 19H02832MEXT | Japan Society for the Promotion of Science (JSPS) 19K22253MEXT | Japan Society for the Promotion of Science (JSPS) 20K22628MEXT | Japan Society for the Promotion of Science (JSPS) 21H05116MEXT | Japan Society for the Promotion of Science (JSPS) 21H05117MEXT | Japan Society for the Promotion of Science (JSPS) 21J00530MEXT | JST | Precursory Research for Embryonic Science and Technology (PRESTO) JPMJPR20EDMEXT | JST | Precursory Research for Embryonic Science and Technology (PRESTO) JPMJPR22A7
6 · The paper itself

Abstract

Recent advances in protein design have ushered in an era of constructing intricate higher-order structures. Nonetheless, orchestrating the assembly of diverse protein units into cohesive artificial structures akin to biological assembly systems, especially in tubular forms, remains elusive. To this end, we develop a methodology inspired by nature, which utilises two distinct protein units to create unique tubular structures under carefully designed conditions. These structures demonstrate dynamic flexibility similar to that of actin filaments, with cryo electron microscopy revealing diverse morphologies, like microtubules. By mimicking actin filaments, helical conformations are incorporated into tubular assemblies, thereby enriching their structural diversity. Notably, these assemblies can be reversibly disassembled and reassembled in response to environmental stimuli, including changes in salt concentration and temperature, mirroring the dynamic behaviour of natural systems. This methodology combines rational protein design with biophysical insights, leading to the creation of biomimetic, adaptable, and reversible higher-order assemblies. This approach deepens our understanding of protein assembly design and complex biological structures. Concurrently, it broadens the horizons of synthetic biology and material science, holding significant implications for unravelling life's fundamental processes and enabling future applications.

Indexed as

CytoskeletonProtein EngineeringProteinsActin CytoskeletonCryoelectron MicroscopyMicrotubulesModels, MolecularProtein ConformationProteins

Identifiers

PMID40695817
PMCPMC12283931

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.