Evidence map›Paper›PMID 40695815›Full record

ArticleNature communications2025

Coupling chromosome organization to genome segregation in Archaea.

Azhar F Kabli, Irene W Ng, Nicholas Read, Parul Pal, Julia Reimann, Ngat T Tran, Sonja-Verena Albers, Tung B K Le, Daniela Barillà

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Journal of bacteriology · 2026
    Review
  2. Review
  3. Article
  4. Article
  5. Regulation of eukaryotic-like cell cycle progression in archaea is coming into focus.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Temporal and spatial coordination of DNA segregation and cell division in an archaeon.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Azhar F KabliDepartment of Biology, University of York, York, United Kingdom.ORCID http://orcid.org/0009-0003-3543-1433
Irene W NgDepartment of Biology, University of York, York, United Kingdom.
Nicholas ReadDepartment of Biology, University of York, York, United Kingdom.
Parul PalDepartment of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom.
Julia ReimannMolecular Biology of Archaea, Microbiology, Faculty of Biology, University of Freiburg, Freiburg, Germany.
Ngat T TranDepartment of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom.
Sonja-Verena AlbersMolecular Biology of Archaea, Microbiology, Faculty of Biology, University of Freiburg, Freiburg, Germany.ORCID http://orcid.org/0000-0003-2459-2226
Tung B K LeDepartment of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom.ORCID http://orcid.org/0000-0003-4764-8851
Daniela BarillàDepartment of Biology, University of York, York, United Kingdom. daniela.barilla@york.ac.uk.ORCID http://orcid.org/0000-0002-3486-7492

Funding

Leverhulme Trust RPG-245Lister Institute of Preventive Medicine FellowshipRCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/M007839/1RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/R006369/1RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/X00645X/1RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/X01097X/1Royal Society URF/R/201020
6 · The paper itself

Abstract

Chromosome segregation is a fundamental process in all life forms and requires coordination with genome organization, replication and cell division. The mechanism that mediates chromosome segregation in archaea remains enigmatic. Previously, we identified two proteins, SegA and SegB, which form a minimalist chromosome partition machine in Sulfolobales. Here we uncover patterns and mechanisms that SegAB employ to link chromosome organization to genome segregation. Deletion of the genes causes growth and chromosome partition defects. ChIP-seq investigations reveal that SegB binds to multiple sites scattered across the chromosome, but mainly localised close to the segAB locus in most of the examined archaeal genera. The sites are predominantly present in intragenic regions and enriched in one of the two compartments into which the chromosome folds. We show that SegB coalesces into multiple foci through the nucleoid, exhibiting a biased localisation towards the cell periphery, which hints at potential tethers to the cell membrane. Atomic force microscopy experiments disclose short-range DNA compaction and long-range looping of distant sites by SegB, pointing to a significant role for SegB in chromosome condensation that in turn enables genome segregation. Collectively, our data put forward SegAB as important players in bridging chromosome organization to genome segregation in archaea.

Indexed as

ArchaeaArchaeal ProteinsChromosomes, ArchaealChromosome SegregationGenome, ArchaealDNA, ArchaealMicroscopy, Atomic ForceArchaeal ProteinsDNA, Archaeal

Identifiers

PMID40695815
PMCPMC12284271

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.