Evidence map›Paper›PMID 40693434›Full record

ArticlemAbs2025

AlphaBind, a domain-specific model to predict and optimize antibody-antigen binding affinity.

Aditya A Agarwal, James Harrang, David Noble, Kerry L McGowan, Adrian W Lange, Emily Engelhart, Miranda C Lahman, Jeffrey Adamo, Xin Yu, Oliver Serang and 5 more

Abstract read
In one paragraph

Article in mAbs, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Aditya A AgarwalData Science, A-Alpha Bio Inc, Seattle, WA, USA.
James HarrangData Science, A-Alpha Bio Inc, Seattle, WA, USA.
David NobleData Science, A-Alpha Bio Inc, Seattle, WA, USA.
Kerry L McGowanData Science, A-Alpha Bio Inc, Seattle, WA, USA.
Adrian W LangeData Science, A-Alpha Bio Inc, Seattle, WA, USA.
Emily EngelhartData Science, A-Alpha Bio Inc, Seattle, WA, USA.
Miranda C LahmanData Science, A-Alpha Bio Inc, Seattle, WA, USA.
Jeffrey AdamoData Science, A-Alpha Bio Inc, Seattle, WA, USA.
Xin YuHealthcare & Life Sciences, Nvidia Corporation, Santa Clara, CA, USA.
Oliver SerangData Science, A-Alpha Bio Inc, Seattle, WA, USA.
Kyle J MinchData Science, A-Alpha Bio Inc, Seattle, WA, USA.
Kimberly Y WellmanData Science, A-Alpha Bio Inc, Seattle, WA, USA.
David A YoungerData Science, A-Alpha Bio Inc, Seattle, WA, USA.
Randolph M LopezData Science, A-Alpha Bio Inc, Seattle, WA, USA.
Ryan O EmersonData Science, A-Alpha Bio Inc, Seattle, WA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antibodies are versatile therapeutic molecules that use combinatorial sequence diversity to cover a vast fitness landscape. Designing optimal antibody sequences, however, remains a major challenge. Recent advances in deep learning provide opportunities to address this challenge by learning sequence-function relationships to accurately predict fitness landscapes. These models enable efficient

Indexed as

Antibodies, MonoclonalAntibody AffinityAntigen-Antibody ReactionsAntigensDeep LearningHumansAntibodies, MonoclonalAntigensAntibody engineeringcomputational protein designmachine learningyeast display

Identifiers

PMID40693434
PMCPMC12296056

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.