Evidence map›Paper›PMID 40692085›Full record

ArticleToxicological sciences : an official journal of the Society of Toxicology2025

Computationally informed point of departure evaluation for proarrhythmic cardiotoxicity assessment using 3D engineered cardiac microtissues from human iPSC-derived cardiomyocytes.

Mark C Daley, Peter Bronk, Tae Yun Kim, Arvin H Soepriatna, Cao T Tran, Ulrike Mende, Kareen L K Coulombe, Bum-Rak Choi

Abstract read
In one paragraph

Article in Toxicological sciences : an official journal of the Society of Toxicology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mark C DaleyCenter for Biomedical Engineering, Brown University, Providence, RI 02912, United States.ORCID 0000-0002-7236-5215
Peter BronkCardiovascular Research Center, Rhode Island Hospital and Warren Alpert Medical School of Brown University, Providence, RI 02903, United States.
Tae Yun KimDepartment of Physics, Korea University, Seoul, 02841, Korea.
Arvin H SoepriatnaCenter for Biomedical Engineering, Brown University, Providence, RI 02912, United States.
Cao T TranCardiovascular Institute, Rhode Island Hospital, Providence, RI 02903, United States.
Ulrike MendeCardiovascular Research Center, Rhode Island Hospital and Warren Alpert Medical School of Brown University, Providence, RI 02903, United States.
Kareen L K CoulombeCenter for Biomedical Engineering, Brown University, Providence, RI 02912, United States.
Bum-Rak ChoiCardiovascular Research Center, Rhode Island Hospital and Warren Alpert Medical School of Brown University, Providence, RI 02903, United States.

Funding

Uncoupling of IL-1 beta and VEGF-A Crosstalk Contributes to Impaired Arteriogenesis Response to Ischemia in Chronic Diabetes MellitusP20GM103652 · NIGMS · OCEAN STATE RESEARCH INSTITUTE, INC. · PI HARRINGTON, ELIZABETH O · 2013 to 2022
$21.3M
Pilot Projects ProgramP30GM149398 · NIGMS · OCEAN STATE RESEARCH INSTITUTE, INC. · PI Peng Zhang · 2023 to 2026
$5.5M
Human 3D Microtissues for Toxicity Testing via Integrated Imaging, Molecular and Functional AnalysesU01ES028184 · NIEHS · BROWN UNIVERSITY · PI BOEKELHEIDE, KIM, MORGAN, JEFFREY R · 2017 to 2021
$3.8M
Brown University Biomedical Innovation to ImpactCOBRE PilotNational Institution of General Medical Sciences P30GM149398National Institution of HealthNIEHS NIH HHS U01 ES028184NIGMS NIH HHS P20 GM103652NIGMS NIH HHS P30 GM149398
6 · The paper itself

Abstract

Human-induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) are a promising new approach for in vitro proarrhythmic cardiotoxicity assessment. However, variation due to differentiation batch, individual sample variation, and non-linear responses to test drugs complicate the prediction of proarrhythmic drug concentrations. This study combines a computational human action potential (AP) model of hERG channel block with experimental data from three-dimensional hiPSC-CM engineered microtissues to optimize point of departure (POD) estimation of drug-induced prolongation of AP duration (APD). Computer simulations predicted that APD prolongation from hERG block follows a logistic curve and that >81% hERG block induced early afterdepolarizations (EADs), which significantly shifted the APD response curve. Curve fitting of APD response by logistic, bilinear breakpoint, and maximal curvature was more accurate prior to EAD onset. Goodness-of-fit testing indicated that logistic regression with ≥6 test concentrations was sufficient to accurately estimate PODs. Power analysis, based on experimental variations between batches (n = 14), molds (n = 57), and microtissues (n = 1701), predicted that PODs from 2 ∼ 3 batches with 10 microtissues per mold using a 5% threshold for APD prolongation detected proarrhythmic cardiotoxicity with a negligible false positive rate. We then applied this POD analysis to hiPSC-CM microtissue data after treatment with well-characterized drugs (i.e. cisapride, ranolazine, quinidine, and verapamil). Using bootstrapping, we estimated PODs and confidence intervals that matched concentrations known to cause proarrhythmic effects in patients. This study identified a robust method for calculating PODs for proarrhythmic cardiotoxicity risk in vitro and developed a framework for experimental design in this and other in vitro platforms.

Indexed as

Arrhythmias, CardiacInduced Pluripotent Stem CellsMyocytes, CardiacAction PotentialsCardiotoxicityCell DifferentiationComputer SimulationERG1 Potassium ChannelHumansModels, CardiovascularTissue EngineeringERG1 Potassium Channelbenchmark dose analysiscardiac arrhythmiascardiotoxicityhiPSC-derived cardiac microtissuesrisk assessment

Identifiers

PMID40692085
PMCPMC12448244

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.