Evidence map›Paper›PMID 40691499›Full record

Articlenpj antimicrobials and resistance2025

Epidemiological Genomics of Klebsiella pneumoniae isolates from hospitals across Colombia.

Victor A Medina, Angela S García-Vega, Fernando Rodríguez, Enmanuel S Triviño-García, Jaime A Robledo, Aura L Leal, Julián C Galvis, Luis F Reyes, Genomic Epidemiology of Antimicrobial Resistance Consortium (GEAR), Iruka N Okeke and 9 more

Abstract read
In one paragraph

Article in npj antimicrobials and resistance, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Circulation of ESBL-producingFrontiers in public health · 2026
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Victor A MedinaGlobal Health Research Unit on Genomic Surveillance of Antimicrobial Resistance (GHRU)-Colombia, CI Tibaitatá, Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), Bogotá, Colombia. vmedina@agrosavia.co.
Angela S García-VegaGlobal Health Research Unit on Genomic Surveillance of Antimicrobial Resistance (GHRU)-Colombia, CI Tibaitatá, Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), Bogotá, Colombia. agarciav@agrosavia.co.
Fernando RodríguezGlobal Health Research Unit on Genomic Surveillance of Antimicrobial Resistance (GHRU)-Colombia, CI Tibaitatá, Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), Bogotá, Colombia. frodriguez@agrosavia.co.
Enmanuel S Triviño-GarcíaGlobal Health Research Unit on Genomic Surveillance of Antimicrobial Resistance (GHRU)-Colombia, CI Tibaitatá, Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), Bogotá, Colombia.
Jaime A RobledoGrupo GERMEN - Laboratorio Médico de Referencia, Medellín, Colombia.
Aura L LealGrupo Para el Control de la Resistencia Bacteriana de Bogotá (GREBO), Facultad de Medicina, Universidad Nacional de Colombia, Bogotá, Colombia.
Julián C GalvisGrupo GERMEN - Laboratorio Médico de Referencia, Medellín, Colombia.
Luis F ReyesUnisabana Center for Translational Science, School of Medicine, Universidad de la Sabana, Chia, Colombia.
Genomic Epidemiology of Antimicrobial Resistance Consortium (GEAR)
Iruka N OkekeCollege of Medicine, University of Ibadan, Ibadan, Nigeria.
Natacha CoutoCentre for Genomic Pathogen Surveillance, Pandemics Science Institute, University of Oxford, Oxford, UK.
Emmanuelle A KumaranCentre for Genomic Pathogen Surveillance, Pandemics Science Institute, University of Oxford, Oxford, UK.
Georgina Lewis-WoodhouseCentre for Genomic Pathogen Surveillance, Pandemics Science Institute, University of Oxford, Oxford, UK.
Silvia ArgimonCentre for Genomic Pathogen Surveillance, Pandemics Science Institute, University of Oxford, Oxford, UK.
Stefany A ArevaloGlobal Health Research Unit on Genomic Surveillance of Antimicrobial Resistance (GHRU)-Colombia, CI Tibaitatá, Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), Bogotá, Colombia.
Anthony P UnderwoodCentre for Genomic Pathogen Surveillance, Pandemics Science Institute, University of Oxford, Oxford, UK.
Xavier FargettonGlobal Health Research Unit on Genomic Surveillance of Antimicrobial Resistance (GHRU)-Colombia, CI Tibaitatá, Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), Bogotá, Colombia.
David M AanensenCentre for Genomic Pathogen Surveillance, Pandemics Science Institute, University of Oxford, Oxford, UK.
Maria P Donado-GodoyGlobal Health Research Unit on Genomic Surveillance of Antimicrobial Resistance (GHRU)-Colombia, CI Tibaitatá, Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), Bogotá, Colombia. pidonado@agrosavia.co.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Klebsiella pneumoniae is one of the most important nosocomial pathogens worldwide. In Colombia, K. pneumoniae has been identified as the second most frequent microbial etiologic agent of healthcare-associated infections. We conducted a prospective local study of 335 K. pneumoniae isolates in 26 nationwide hospitals from 2020 to 2021. We found that the spread of carbapenem resistance was mediated by successful clones belonging to sequence types (ST) such as ST11, ST1082, and ST307, related to intra-hospital infections. We observed that bla

Identifiers

PMID40691499
PMCPMC12280007

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.