Evidence map›Paper›PMID 40691227›Full record

ArticleNature communications2025

Downstream metabolites of (+)-cis-12-oxo-phytodienoic acid function as noncanonical bioactive jasmonates in Arabidopsis thaliana.

Minoru Ueda, Rina Saito, Yuho Nishizato, Tsumugi Kitajima, Nobuki Kato

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Minoru UedaDepartment of Chemistry, Graduate School of Science, Tohoku University, Sendai, Japan. minoru.ueda.d2@tohoku.ac.jp.ORCID http://orcid.org/0000-0002-2305-3303
Rina Saito *Department of Molecular and Chemical Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, Japan.
Yuho Nishizato *Department of Chemistry, Graduate School of Science, Tohoku University, Sendai, Japan.
Tsumugi KitajimaDepartment of Molecular and Chemical Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, Japan.
Nobuki KatoDepartment of Chemistry, Graduate School of Science, Tohoku University, Sendai, Japan.

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 23H00316, 23K17967, 22KK0076, 21K19037, 20H00402, JPJSBP120229905, and JPJSBP120239903Ministry of Education, Culture, Sports, Science and Technology (MEXT) JP23H04880 and JP23H04883
6 · The paper itself

Abstract

(+)-cis-12-oxo-phytodienoic acid (cis-OPDA) is a biosynthetic precursor of the plant hormone (+)-7-iso-Jasmonoyl-L-isoleucine (JA-Ile). It was proposed as an endogenous chemical signal independent of the JA-Ile receptor COI1-JAZ in Arabidopsis thaliana. The bioactive form of cis-OPDA that induces COI1-JAZ-independent gene expression remains unknown. Here we demonstrate that the downstream metabolites of cis-OPDA, especially tetranor-cis-OPDA (tn-cis-OPDA) and 7-iso-4,5-didehydro-JA (4,5-ddh-JA), upregulate the expression of the OPDA marker genes such as ZAT10 and ERF5. These downstream metabolites function independently of the JA-Ile-COI1-JAZ-MYCs canonical jasmonate signaling module, and their electrophilic α, β-unsaturated carbonyl functionalities are essential for their bioactivity. These results raise a possibility that the downstream metabolites of cis-OPDA would function as endogenous chemical signal in A. thaliana.

Indexed as

ArabidopsisCyclopentanesFatty Acids, UnsaturatedOxylipinsArabidopsis ProteinsGene Expression Regulation, PlantIsoleucinePlant Growth RegulatorsSignal Transduction12-oxophytodienoic acidArabidopsis ProteinsCyclopentanesFatty Acids, UnsaturatedIsoleucinejasmonic acidjasmonoyl-isoleucineOxylipinsPlant Growth Regulators

Identifiers

PMID40691227
PMCPMC12280011

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.