Evidence map›Paper›PMID 40691148›Full record

ArticleNature communications2025

Calcium-dependent oligomerization of scavenger receptor CD163 facilitates the endocytosis of ligands.

Hua Xu, Xiaohui Song, Xiao-Dong Su

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Cryo-EM provides insight into how thebioRxiv : the preprint server for biology · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Pigs with CD163 Mutation Conferred PRRSV Resistance.Animals : an open access journal from MDPI · 2026
    Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hua Xu *Biomedical Pioneering Innovation Center (BIOPIC), and State Key Laboratory of Gene Function and Modulation Research, School of Life Sciences, Peking University, Beijing, China. xuhua@pku.edu.cn.ORCID http://orcid.org/0000-0001-9283-080X
Xiaohui Song *Biomedical Pioneering Innovation Center (BIOPIC), and State Key Laboratory of Gene Function and Modulation Research, School of Life Sciences, Peking University, Beijing, China.
Xiao-Dong SuBiomedical Pioneering Innovation Center (BIOPIC), and State Key Laboratory of Gene Function and Modulation Research, School of Life Sciences, Peking University, Beijing, China. xdsu@pku.edu.cn.ORCID http://orcid.org/0000-0001-6948-2317

Funding

China Postdoctoral Science Foundation 8206400138Ministry of Science and Technology of the People's Republic of China (Chinese Ministry of Science and Technology) 2021YFC2301400
6 · The paper itself

Abstract

Scavenger receptor CD163 is a marker of M2 type macrophages that play important roles in anti-inflammatory processes. The most extensively studied function of CD163 is related to the elimination of hemoglobin-haptoglobin (Hb-Hp) complexes, to prevent potential oxidative toxicity of the iron-containing heme. However, the structural mechanism of CD163 in ligand binding and internalization remains elusive. Here, we present the cryo-electron microscopy structure of human Hb-Hp recognition by the full ectodomain of CD163. We illuminate that CD163 forms calcium-dependent oligomers and primarily exists as trimeric form under the condition of 2.5 mM calcium. It mainly utilizes two protomers to interact with Hb-Hp complex asymmetrically, while the third protomer of the trimer also has the potential to form calcium-mediated contacts with Hp. Flow cytometry analyses reveal that oligomerization of CD163 significantly enhances the efficiency of ligand endocytosis. These results advance our understanding of the role of CD163 in ligand scavenging.

Indexed as

Antigens, CDAntigens, Differentiation, MyelomonocyticCalciumEndocytosisReceptors, Cell SurfaceCD163 AntigenCryoelectron MicroscopyHaptoglobinsHemoglobinsHumansLigandsMacrophagesProtein BindingProtein MultimerizationAntigens, CDAntigens, Differentiation, MyelomonocyticCalciumCD163 Antigenhaptoglobin-hemoglobin complexHaptoglobinsHemoglobinsLigandsReceptors, Cell Surface

Identifiers

PMID40691148
PMCPMC12279954

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.