Evidence map›Paper›PMID 40690489›Full record

ArticlePLoS computational biology2025

Analyzing greedy vaccine allocation algorithms for metapopulation disease models.

Jeffrey Keithley, Akash Choudhuri, Bijaya Adhikari, Sriram V Pemmaraju

Abstract read
In one paragraph

Article in PLoS computational biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jeffrey KeithleyDepartment of Computer Science, University of Iowa, Iowa City, Iowa, United States of America.ORCID 0000-0001-5814-6051
Akash ChoudhuriDepartment of Computer Science, University of Iowa, Iowa City, Iowa, United States of America.
Bijaya AdhikariDepartment of Computer Science, University of Iowa, Iowa City, Iowa, United States of America.
Sriram V PemmarajuDepartment of Computer Science, University of Iowa, Iowa City, Iowa, United States of America.ORCID 0000-0002-0834-3476

Funding

NCEZID CDC HHS U01 CK000594
6 · The paper itself

Abstract

As observed in the case of COVID-19, effective vaccines for an emerging pandemic tend to be in limited supply initially and must be allocated strategically. The allocation of vaccines can be modeled as a discrete optimization problem that prior research has shown to be computationally difficult (i.e., NP-hard) to solve even approximately. Using a combination of theoretical and experimental results, we show that this hardness result may be circumvented. We present our results in the context of a metapopulation model, which views a population as composed of geographically dispersed heterogeneous subpopulations, with arbitrary travel patterns between them. In this setting, vaccine bundles are allocated at a subpopulation level, and so the vaccine allocation problem can be formulated as a problem of maximizing an integer lattice function [Formula: see text] subject to a budget constraint [Formula: see text]. We consider a variety of simple, well-known greedy algorithms for this problem and show the effectiveness of these algorithms for three problem instances at different scales: New Hampshire (10 counties, population 1.4 million), Iowa (99 counties, population 3.2 million), and Texas (254 counties, population 30.03 million). We provide a theoretical explanation for this effectiveness by showing that the approximation factor (a measure of how well the algorithmic output for a problem instance compares to its theoretical optimum) of these algorithms depends on the submodularity ratio of the objective function g. The submodularity ratio of a function is a measure of how distant g is from being submodular; here submodularity refers to the very useful "diminishing returns" property of set and lattice functions, i.e., the property that as the function inputs are increased the function value increases, but not by as much.

Indexed as

AlgorithmsCOVID-19COVID-19 VaccinesComputational BiologyComputer SimulationHumansIowaPandemicsSARS-CoV-2COVID-19 Vaccines

Identifiers

PMID40690489
PMCPMC12289052

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.