Evidence map›Paper›PMID 40690001›Full record

ArticleEuropean biophysics journal : EBJ2025

Equations describing semi-confluent cell growth (II) colony formation on a flat surface.

Damien Hall

Abstract read
In one paragraph

Article in European biophysics journal : EBJ, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Damien HallDepartment of Chemistry and Chemical Biology. Center for Quantitative Biology, Rutgers, The State University of New Jersey, New Brunswick, NJ, 08854, USA. damien.Hall@rutgers.edu.ORCID http://orcid.org/0000-0003-1538-7618

Funding

Rutgers, The State University of New Jersey Visiting Scientist Appointment
6 · The paper itself

Abstract

Individual cell growth can be affected by the presence of adjacent cells through a complex and multi-factorial biological process known alternatively as contact inhibition or confluence sensing. In a previous paper (Hall D (2024) Equations describing semi-confluent cell growth (I) Analytical approximations. Biophys Chem 307:107173), sets of differential equations (with implicit analytical solutions) were developed to describe completely symmetrical cases of multicellular colony growth affected by variable levels of contact inhibition. Here we develop a model based on a spherical cap approximation of colony growth, that is able to describe variable contact inhibition for non-symmetrical multilayer cell formation on a solid plate. Although the model is realized as a set of interrelated ordinary differential equations, it is effectively governed by two parameters and is therefore capable for use in quantitative analysis of the kinetics of cell culture parameters such as shape, colony size and receding contact angle. The model is capable of accounting for transitions from monolayer to multilayer growth in a robust fashion.

Indexed as

Cell ProliferationModels, BiologicalKineticsSurface PropertiesBiofilm growthCell colony formationCell contact inhibitionCell culture modelKinetics of colony growthSpherical cap approximation

Identifiers

PMID40690001
PMCPMC12640341

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.