Evidence map›Paper›PMID 40689726›Full record

ArticleProtein science : a publication of the Protein Society2025

A multidomain hydrolase from the thermophile Thermanaeromonas toyohensis degrades high molecular mass forms of polyhydroxybutyrate.

Stephen Quirk, Gwendell M Thomas, Lily J Wallace, Megan J Woody, Mary E Peek, Raquel L Lieberman

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Stephen QuirkGlobal Research and Development, Kimberly Clark Corp, Roswell, Georgia, USA.ORCID 0000-0002-4497-1023
Gwendell M ThomasSchool of Chemistry & Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, USA.ORCID 0000-0002-2079-8668
Lily J WallaceSchool of Chemistry & Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, USA.
Megan J WoodySchool of Chemistry & Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, USA.
Mary E PeekSchool of Chemistry & Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, USA.ORCID 0000-0003-0634-1036
Raquel L LiebermanSchool of Chemistry & Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, USA.ORCID 0000-0001-9345-3735

Funding

U.S. Department of Education P200A210014
6 · The paper itself

Abstract

The use of polyhydroxybutyrate (PHB) bioplastics has the potential to create a circular and sustainable recycling plastic system. Here, we focus on PHB degradation and characterize the multidomain PHB hydrolyzing enzyme from the extremophile Thermanaeromonas tohohensis. The catalytic domain fold is conserved across a diverse taxonomic range, but the C-terminal domains are unique amongst PHBases and instead share similarities with carbohydrate degrading enzymes from human gut microbiota. The enzyme has a preference for higher molecular weight PHB. Hydrolysis of PHB films correlates with the ability of the enzyme to bind those films, most likely driven by its C-terminal substrate binding domain. The enzyme denatures in a highly cooperative manner over a short temperature range, and the kinetics of folding/unfolding are well described by Eyring theory. Finally, the study of this enzyme has been incorporated into an undergraduate biochemistry teaching laboratory that focuses on "real life" research problems with relevance to industry.

Indexed as

Bacterial ProteinsHydrolasesHydroxybutyratesHydrolysisKineticsMolecular WeightPolyhydroxybutyratesBacterial ProteinsHydrolasesHydroxybutyratespolyhydroxybutyratePolyhydroxybutyratesbioplasticcourse‐based undergraduate research experience (CURE)enzymologypolyhydroxybutyratepolymer hydrolysisserine hydrolasethermophile

Identifiers

PMID40689726
PMCPMC12278694

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.