Evidence map›Paper›PMID 40689620›Full record

ArticlemSystems2025

Time-series metatranscriptomics reveals differential salinity effects on the methanogenic food web in paddy soil.

Xi Zhou, Xin Li, Qicheng Bei, Xingjie Wu, Guihua Xu, Xiuzhu Dong, Werner Liesack, Zhenling Cui, Fusuo Zhang, Jingjing Peng

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mSystems, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Xi ZhouState Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, Beijing, China.ORCID 0009-0000-5076-6854
Xin LiInstitute of Agricultural and Nutritional Sciences, Martin-Luther-Universität Halle Wittenberg, Halle (Saale), Germany.
Qicheng BeiDepartment of Biological Sciences, University of Southern California, Los Angeles, California, USA.
Xingjie WuState Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, Beijing, China.
Guihua XuSchool of Light Industry Science and Engineering, Beijing Technology and Business University, Beijing, China.
Xiuzhu DongState Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Werner LiesackMax Planck Institute for Terrestrial Microbiology, Marburg, Germany.ORCID 0000-0002-9533-1552
Zhenling CuiState Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, Beijing, China.
Fusuo ZhangState Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, Beijing, China.
Jingjing PengState Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, Beijing, China.ORCID 0000-0001-7596-4494

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Saltwater intrusion and sea level rise (SWISLR) threaten coastal agroecosystems, yet their impact on the methanogenic food web in rice paddies remains virtually unknown. Using "double-RNA" metatranscriptomics (rRNA, mRNA), we investigated salinity effects on the methanogenic community in straw-amended slurries following different preincubation periods. Our results demonstrate that salt stress significantly inhibits methane (CH

Indexed as

Food ChainMethaneSalinitySoil MicrobiologyTranscriptomeOryzaSalt StressSoilMethaneSoilCAZymeCH4metatranscriptomicsmethanogenesissalt stress

Identifiers

PMID40689620
PMCPMC12363242

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.