Evidence map›Paper›PMID 40689158›Full record

ArticleNEJM AI2025

Expert-Level Detection of Epilepsy Markers in EEG on Short and Long Timescales.

J Li, D M Goldenholz, M Alkofer, C Sun, F A Nascimento, J J Halford, B C Dean, M Galanti, A F Struck, A S Greenblatt and 24 more

Abstract read
In one paragraph

Article in NEJM AI, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Epilepsy grand challenge 2025.Frontiers in neurology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors.

J LiNational Institute of Health Data Science, Peking University, Beijing.ORCID 0000-0002-5013-7887
D M GoldenholzHarvard Medical School, Boston.ORCID 0000-0002-8370-2758
M AlkoferHarvard Medical School, Boston.ORCID 0009-0002-2311-0694
C SunHarvard Medical School, Boston.ORCID 0000-0002-1762-0877
F A NascimentoNeurology Department, Washington University in St. Louis, St Louis, MO.ORCID 0000-0002-7161-6385
J J HalfordRalph H. Johnson VA Medical Center, Charleston, SC.ORCID 0000-0003-1681-6744
B C DeanClemson University School of Computing, Clemson, SC.ORCID 0000-0003-1164-3282
M GalantiClemson University School of Computing, Clemson, SC.ORCID 0000-0002-7544-0591
A F StruckNeurology Department, Washington University in St. Louis, St Louis, MO.ORCID 0000-0002-9103-1798
A S GreenblattNeurology Department, Washington University in St. Louis, St Louis, MO.ORCID 0000-0002-8417-3667
A D LamHarvard Medical School, Boston.ORCID 0000-0001-7754-4637
A HerlopianYale University School of Medicine, New Haven, CT.ORCID 0000-0002-0189-7011
C NwankwoAkron Children's Hospital, Akron, OH.ORCID 0009-0003-7770-6917
D WeberSt. Louis University School of Medicine, St Louis, MO.ORCID 0000-0002-6650-0564
D MausHarvard Medical School, Boston.ORCID 0000-0002-8195-8637
H A HaiderNeurology Department, University of Chicago, Chicago.ORCID 0000-0001-7118-3690
I KarakisEmory University School of Medicine, Atlanta.ORCID 0000-0001-5122-7211
J Y YooIcahn School of Medicine at Mount Sinai, New York, NY.ORCID 0000-0001-7242-9779
M C NgUniversity of Manitoba, Winnipeg, MB, Canada.ORCID 0000-0002-6258-5943
O SelioutskiStony Brook University, Stony Brook, NY.ORCID 0000-0002-5477-527X
O TaraschenkoUniversity of Nebraska Medical Center, Omaha.ORCID 0000-0003-4848-8909
G OsmanMayo Clinic, Jacksonville, FL.ORCID 0000-0002-2231-2473
R KatyalLouisiana State University Health Shreveport, Shreveport.ORCID 0000-0002-9147-3035
S E SchmittRalph H. Johnson VA Medical Center, Charleston, SC.ORCID 0000-0003-1384-9794
S BenbadisUniversity of South Florida, Tampa.ORCID 0000-0003-0214-5492
S S CashHarvard Medical School, Boston.ORCID 0000-0002-4557-6391
W O TatumMayo Clinic, Jacksonville, FL.ORCID 0000-0002-4536-3791
Z SheikhNeurology Department, Virginia Commonwealth University, Richmond.ORCID 0000-0002-0857-7993
W Y KongHarvard Medical School, Boston.ORCID 0000-0003-0553-9577
G BayasHarvard Medical School, Boston.ORCID 0009-0005-6156-3303
N TurleyHarvard Medical School, Boston.ORCID 0009-0009-4806-578X
S HongNational Institute of Health Data Science, Peking University, Beijing.ORCID 0000-0001-7521-5127
M B WestoverHarvard Medical School, Boston.ORCID 0000-0003-4803-312X
J JingHarvard Medical School, Boston.ORCID 0000-0002-2415-5854

Funding

Translational Imaging and Behavioral Assessment (TIBA) CoreP20GM130447 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Haiying Shen · 2020 to 2026
$20.7M
Data-Driven Sleep Biomarkers of Brain Health, Heart Health, and MortalityR01HL161253 · NHLBI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI CLIFFORD, GARI DAVID, MIGNOT, EMMANUEL J · 2022 to 2025
$8.3M
Comparative Safety of Seizure Prophylaxis within the Medicare ProgramR01AG073410 · NIA · MASSACHUSETTS GENERAL HOSPITAL · PI Lidia Maria Veras Rocha de Moura · 2021 to 2026
$4.1M
Low Neurophysiologic Resistance to Anesthetics as a Marker of Preclinical/Prodromal Alzheimer's Disease and Neurovascular Pathology, Delirium risk and InattentionR01AG073598 · NIA · STANFORD UNIVERSITY · PI Miles Berger · 2022 to 2026
$3.8M
Integrative Motor Activity Biomarker for the Risk of Alzheimer's RiskRF1AG064312 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI HU, KUN · 2019 to 2019
$3.6M
Multimodal Network Connectivity Architecture (MOCA) of the Brain and its Role in the Recovery of Consciousness in Comatose Cardiac Arrest PatientsR01NS102574 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI GREER, DAVID MATTHEW, WU, ONA · 2018 to 2022
$3.4M
Investigation of Sleep in the Intensive Care Unit (ICU-SLEEP)R01NS102190 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI WESTOVER, MICHAEL BRANDON · 2018 to 2022
$3.2M
Integration and interoperability of complex data and tissues from the human brainUG3TR004501 · NCATS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI LOEB, JEFFREY A · 2023 to 2025
$3.1M
Prospective Validation of Neurophysiologic Outcome Prediction in Acute Brain InjuryR01NS126282 · NINDS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI Aaron F Struck, Michael Brandon Westover · 2023 to 2026
$2.9M
Big Data and Deep Learning for the Interictal-Ictal-Injury ContiuumR01NS107291 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI WESTOVER, MICHAEL BRANDON · 2018 to 2022
$2.8M
Establishing a Brain Health Index from the Sleep ElectroencephalogramRF1NS120947 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI CASH, SYDNEY S, THOMAS, ROBERT JOSEPH · 2021 to 2021
$2.4M
Non-Invasive Seizure Forecasting System Using E-Diaries, Internal and External FactorsK23NS124656 · NINDS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI Daniel M Goldenholz · 2022 to 2026
$954k
HSRD VA I01 HX003107NCATS NIH HHS UG3 TR004501NHLBI NIH HHS R01 HL161253NIA NIH HHS R01 AG073410NIA NIH HHS R01 AG073598NIA NIH HHS RF1 AG064312NIGMS NIH HHS P20 GM130447NINDS NIH HHS K23 NS124656NINDS NIH HHS R01 NS102190NINDS NIH HHS R01 NS102574NINDS NIH HHS R01 NS107291NINDS NIH HHS R01 NS126282NINDS NIH HHS R21 NS137117NINDS NIH HHS RF1 NS120947
6 · The paper itself

Abstract

backgroundEpileptiform discharges, or spikes, within electroencephalogram (EEG) recordings are essential for diagnosing epilepsy and localizing seizure origins. Artificial intelligence (AI) offers a promising approach to automating detection, but current models are often hindered by artifact-related false positives and often target either event- or EEG-level classification, thus limiting clinical utility.

methodsWe developed SpikeNet2, a deep-learning model based on a residual network architecture, and enhanced it with hard-negative mining to reduce false positives. Our study analyzed 17,812 EEG recordings from 13,523 patients across multiple institutions, including Massachusetts General Brigham (MGB) hospitals. Data from the Human Epilepsy Project (HEP) and SCORE-AI (SAI) were also included. A total of 32,433 event-level samples, labeled by experts, were used for training and evaluation. Performance was assessed using the area under the receiver operating characteristic curve (AUROC), the area under the precision-recall curve (AUPRC), calibration error, and a modified area under the curve (mAUC) metric. The model's generalizability was evaluated using external datasets.

resultsSpikeNet2 demonstrated strong performance in event-level spike detection, achieving an AUROC of 0.973 and an AUPRC of 0.995, with 44% of experts surpassing the model on the MGB dataset. In external validation, the model achieved an AUROC of 0.942 and an AUPRC of 0.948 on the HEP dataset. For EEG-level classification, SpikeNet2 recorded an AUROC of 0.958 and an AUPRC of 0.959 on the MGB dataset, an AUROC of 0.888 and an AUPRC of 0.823 on the HEP dataset, and an AUROC of 0.995 and an AUPRC of 0.991 on the SAI dataset, with 32% of experts outperforming the model. The false-positive rate was reduced to an average of nine spikes per hour.

conclusionsSpikeNet2 offers expert-level accuracy in both event-level spike detection and EEG-level classification, while significantly reducing false positives. Its dual functionality and robust performance across diverse datasets make it a promising tool for clinical and telemedicine applications, particularly in resource-limited settings. (Funded by the National Institutes of Health and others.).

Identifiers

PMID40689158
PMCPMC12276842

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.