Evidence map›Paper›PMID 40687852›Full record

ArticleFrontiers in microbiology2025

Genetic and biochemical diversity of terpene biosynthesis in cyanobacterial strains from tropical soda lakes.

Mauricio J Machado, Fernanda R Jacinavicius, Rhuana V Médice, Rafael B Dextro, Anderson M T Feitosa, Marcio B Weiss, Thierry A Pellegrinetti, Simone R Cotta, Camila M Crnkovic, Marli F Fiore

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Characterization ofCurrent issues in molecular biology · 2026
    Article
  3. Article
  4. Article
  5. Frontiers in microbiology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mauricio J MachadoCenter for Nuclear Energy in Agriculture, University of São Paulo, Piracicaba, Brazil.
Fernanda R JacinaviciusCenter for Nuclear Energy in Agriculture, University of São Paulo, Piracicaba, Brazil.
Rhuana V MédiceSchool of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil.
Rafael B DextroCenter for Nuclear Energy in Agriculture, University of São Paulo, Piracicaba, Brazil.
Anderson M T FeitosaCenter for Nuclear Energy in Agriculture, University of São Paulo, Piracicaba, Brazil.
Marcio B WeissSchool of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil.
Thierry A PellegrinettiCenter for Nuclear Energy in Agriculture, University of São Paulo, Piracicaba, Brazil.
Simone R Cotta"Luiz de Queiroz" College of Agriculture, University of São Paulo, Piracicaba, Brazil.
Camila M CrnkovicSchool of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil.
Marli F FioreCenter for Nuclear Energy in Agriculture, University of São Paulo, Piracicaba, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Terpenes and terpenoids are vital components in diverse metabolic pathways, forming the terpenome-the complete spectrum of terpene-related compounds biosynthesized by an organism. Integrating bioinformatic tools has significantly enhanced the ability to assess metabolic potential by combining these computational approaches with experimental biochemical data. Furthermore, gene annotation provides critical insights into specialized targets, facilitating the identification of shared or unique features across different strains. Aims and methods: This study investigates the presence of terpene compounds in cyanobacterial strains isolated from tropical soda lakes using a combination of gene mining, synteny analysis, phylogenetics, and metabolomics. Results and discussion: Key enzymes, including phytoene synthase and squalene hopene cyclase, were identified, showing significant similarities and evolutionary links to gene copies in Cyanobacteria from diverse ecological environments. Metabolomic analysis complemented genomic predictions, uncovering a rich diversity of tetraterpene compounds, particularly carotenoids. Notably, triterpene hopanoids were found exclusively in a unicellular strain. These compounds show significant potential for cellular protection, metabolic adaptation, and biotechnological uses. They might support microbial communities in extreme environments, such as the saline-alkaline lakes of the Pantanal Biome in Brazil, developing unique survival and resilience strategies in these harsh conditions. Conclusion: This study highlights the extensive range of insights that can be obtained by integrating genetics and biochemistry in exploring cyanobacterial diversity, especially from organisms thriving in extreme environments.

Indexed as

biosynthetic gene clustercarotenoidsenvironmental adaptationgenomicisoprenemetabolomic

Identifiers

PMID40687852
PMCPMC12271159

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.