Evidence map›Paper›PMID 40684105›Full record

ArticleBMC plant biology2025

Genome-wide identification of the phosphofructokinase gene family in maize (Zea mays L.) and their expression levels under abiotic stress and phytohormones.

Weichao Fu, Delong Fan, Shenkui Liu, Yuanyuan Bu

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Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

What it found

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Identification of theFrontiers in genetics · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Weichao FuKey Laboratory of Saline-Alkali Vegetation Ecology Restoration (Northeast Forestry University), Ministry of Education, Harbin, 150040, China.
Delong FanKey Laboratory of Saline-Alkali Vegetation Ecology Restoration (Northeast Forestry University), Ministry of Education, Harbin, 150040, China.
Shenkui LiuState Key Laboratory of Subtropical Silviculture, Zhejiang A & F University, Lin'an, Hangzhou, 311300, China.
Yuanyuan BuKey Laboratory of Saline-Alkali Vegetation Ecology Restoration (Northeast Forestry University), Ministry of Education, Harbin, 150040, China. yuanyuanbu@nefu.edu.cn.ORCID http://orcid.org/0000-0002-7133-613X

Funding

Heilongjiang Province Government Postdoctoral Science Foundation LBH-Q18008Program for Changjiang Scholars and Innovative Research Team in University No. IRT17R99
6 · The paper itself

Abstract

backgroundPhosphofructokinase (PFK) is the primary rate-limiting enzyme and regulatory site of the glycolysis process, which is crucial for plant growth and the regulation of stress response. The PFK genes in Arabidopsis (Arabidopsis thaliana), wheat (Triticum aestivum), rice (Oryza sativa), cotton (Gossypium spp.) and potato (Solanum tuberosum) have been comprehensively analyzed. However, the PFK genes in maize (Zea mays L.) have not been systematically studied.

resultsIn this study, we performed a comprehensive bioinformatic analysis of the maize genome and identified 18 ZmPFK genes. Phylogenetic analysis indicated that these genes are divided into 5 subfamilies. The evolutionary patterns and divergence levels indicate that ZmPFK genes were present before the divergence of dicotyledons and have been highly conserved, undergoing purifying selection through out evolution. Expression analysis showed that most ZmPFK genes exhibited variable expression levels across different tissues and developmental stages. Based on transcriptome data and promoter element analysis, we specifically focused on eight ZmPFK genes whose promoters contained numerous plant hormones and stress response elements. These genes were up-regulated under different abiotic stresses as confirmed by RT-qPCR analysis, highlighting their important roles in plant growth and stress response.

conclusionsIn this study, the structure, location and evolutionary relationship of maize PFK gene family members were analyzed for the first time. We identified the ZmPFK genes involved in stress and plant hormone response by combining promoter element analysis, transcriptome data, and RT-qPCR analysis. This study provides valuable insights into the involvement of maize glycolysis in stress response.

Indexed as

PhosphofructokinasesPlant Growth RegulatorsPlant ProteinsStress, PhysiologicalZea maysGene Expression Regulation, PlantGenome, PlantMultigene FamilyPhylogenyPhosphofructokinasesPlant Growth RegulatorsPlant ProteinsExpression analysisGene familyMaize (Zea mays L.)Phosphofructokinase (PFK)Phylogenetic analysis

Identifiers

PMID40684105
PMCPMC12275240

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.