Evidence map›Paper›PMID 40682660›Full record

ArticleCellular and molecular life sciences : CMLS2025

Ceramide and the membrane-fusion activity of LC3/GABARAP autophagy proteins.

Yaiza R Varela, Camila C Aguirre, Marina N Iriondo, Uxue Ballesteros, M Isabel Collado, Asier Etxaniz, L Ruth Montes, Felix M Goñi, Alicia Alonso

Abstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Lysosomal homeostasis at the crossroads of neurodegeneration.The Journal of clinical investigation · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yaiza R Varela *Department of Biochemistry and Molecular Biology, Instituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, E-48940, Spain.ORCID http://orcid.org/0000-0002-7601-4025
Camila C Aguirre *Department of Biochemistry and Molecular Biology, Instituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, E-48940, Spain.ORCID http://orcid.org/0009-0003-3625-5531
Marina N IriondoDepartment of Biochemistry and Molecular Biology, Instituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, E-48940, Spain.ORCID http://orcid.org/0000-0002-3816-0865
Uxue BallesterosDepartment of Biochemistry and Molecular Biology, Instituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, E-48940, Spain.ORCID http://orcid.org/0000-0001-8166-6485
M Isabel ColladoSGIKER, Universidad del País Vasco, Barrio Sarriena s/n, Leioa, 48940, Spain.ORCID http://orcid.org/0009-0004-8939-230X
Asier EtxanizDepartment of Biochemistry and Molecular Biology, Instituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, E-48940, Spain.ORCID http://orcid.org/0000-0003-2916-8256
L Ruth MontesDepartment of Biochemistry and Molecular Biology, Instituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, E-48940, Spain.ORCID http://orcid.org/0000-0002-4766-8417
Felix M GoñiDepartment of Biochemistry and Molecular Biology, Instituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, E-48940, Spain.ORCID http://orcid.org/0000-0001-6270-9216
Alicia AlonsoDepartment of Biochemistry and Molecular Biology, Instituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa, E-48940, Spain. alicia.alonso@ehu.eus.ORCID http://orcid.org/0000-0002-2730-7470

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Macroautophagy is a cellular degradation process characterized by the formation of the double-membrane structure termed autophagosome (AP). The process of AP formation is not fully understood, but it is thought to happen through the combined action of direct lipid transfer and incorporation of new vesicles to the edges of the growing structure. Human LC3/GABARAP autophagy-related proteins are known to induce vesicle tethering and lipid mixing in vitro, which makes them suitable for the latter expansion mechanism. Ceramide (Cer) is a sphingolipid previously described to facilitate membrane fusion. Cer has also been related to macroautophagy modulation previously, although its specific role remains unclear. Moreover, the presence of sphingolipids in the AP has been suggested by recent experiments, increasing the relevance of Cer in macroautophagy. The present work has investigated the potential role that Cer could have on the proposed fusion of new vesicles to the nascent AP membrane. Interaction of purified ATG proteins with lipid vesicles of defined composition has been quantified using fluorescence spectroscopic techniques. Our results suggest that, if present, Cer could promote the vesicle tethering and leakage-free intervesicular lipid mixing induced by GABARAP and GABARAPL1, which would in turn mediate AP membrane expansion.

Indexed as

Adaptor Proteins, Signal TransducingAutophagyCeramidesMembrane FusionMicrotubule-Associated ProteinsApoptosis Regulatory ProteinsAutophagosomesHumansAdaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsCeramidesGABARAP protein, humanMAP1LC3A protein, humanMicrotubule-Associated ProteinsAutophagosomeAutophagyCeramideLC3/GABARAPMembrane fusion

Identifiers

PMID40682660
PMCPMC12276180

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.