Evidence map›Paper›PMID 40679838›Full record

ArticleJournal of the American Chemical Society2025

Taming Tautomerism in Organic Crystal Structure Prediction.

Cody J Perry, Sebastian A Ramos, Maria C Phelps, Leonard J Mueller, Gregory J O Beran

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Best practices in `0 K' DFT energy calculations on molecular crystal structures.Acta crystallographica. Section C, Structural chemistry · 2026
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Cody J PerryDepartment of Chemistry, University of California Riverside, Riverside, California 92521, United States.
Sebastian A RamosDepartment of Chemistry, University of California Riverside, Riverside, California 92521, United States.
Maria C PhelpsDepartment of Chemistry, University of California Riverside, Riverside, California 92521, United States.
Leonard J MuellerDepartment of Chemistry, University of California Riverside, Riverside, California 92521, United States.ORCID 0000-0002-2607-9875
Gregory J O BeranDepartment of Chemistry, University of California Riverside, Riverside, California 92521, United States.ORCID 0000-0002-2229-2580

Funding

Structural and proton dynamics of pyridoxal-5’-phosphate dependent enzymes Resubmission (Equipment Supplement)R01GM137008 · NIGMS · UNIVERSITY OF GEORGIA · PI KOVALEVSKYI, ANDRII Y, MUELLER, LEONARD J · 2020 to 2023
$2.8M
NMR crystallography: Imaging active site chemistry and protonation statesR35GM145369 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Leonard J Mueller · 2022 to 2026
$2.1M
NIGMS NIH HHS R01 GM137008NIGMS NIH HHS R35 GM145369
6 · The paper itself

Abstract

Tautomerism influences the solubility, stability, efficacy, and even toxicity of drug formulations. Computational solid-form screening is increasingly being used to help identify effective drug formulations and derisk against undesirable crystal forms. Here, however, we demonstrate that widely used density functionals predict tautomeric crystal polymorph energetics poorly, largely due to density-driven delocalization error. We first show how these DFT models incorrectly identify the preferred tautomeric polymorphs of 2-thiobarituric acid and the antihelmintic drug mebendazole and that some functionals substantially underestimate the barrier to solid-state tautomerization. Surveying 18 additional examples, we find that tautomeric polymorph energy differences defy conventional wisdom by exceeding the normal 10 kJ/mol energy window associated with crystal polymorphism in ∼40% of the cases, sometimes by tens of kJ/mol. Moreover, the DFT errors in the polymorph energy differences are strikingly large: they can reach tens of kJ/mol and produce the wrong qualitative stability ordering in ∼20-30% of the cases. We address the challenge of predicting tautomeric polymorphs through a general solution that combines periodic hybrid DFT with intramolecular coupled-cluster theory corrections to substantially improve agreement with experiment. Most notably, our refined models reveal that the experimentally reported crystal structure of mebendazole form B features the incorrect tautomer─a prediction that is confirmed via solid-state NMR analysis.

Identifiers

PMID40679838
PMCPMC13012796

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.