Evidence map›Paper›PMID 40678464›Full record

ArticleMethodsX2025

Use of cryopreserved whole blood samples in the Comet assay for detection of DNA damage in human population studies.

K L Cooper, E J Dashner-Titus, J Ong, D MacKenzie, L G Hudson

Abstract read
In one paragraph

Article in MethodsX, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

K L CooperDepartment of Pharmaceutical Sciences, College of Pharmacy, MSC09 5360 1 University of New Mexico, Albuquerque, NM 87106, USA.
E J Dashner-TitusDepartment of Pharmaceutical Sciences, College of Pharmacy, MSC09 5360 1 University of New Mexico, Albuquerque, NM 87106, USA.
J OngCommunity Environmental Health Program, College of Pharmacy, University of New Mexico, Albuquerque, NM 87106, USA.
D MacKenzieDepartment of Pharmaceutical Sciences, College of Pharmacy, MSC09 5360 1 University of New Mexico, Albuquerque, NM 87106, USA.
L G HudsonDepartment of Pharmaceutical Sciences, College of Pharmacy, MSC09 5360 1 University of New Mexico, Albuquerque, NM 87106, USA.

Funding

WOMEN'S CANCERS RESEARCH PROGRAMP30CA118100 · NCI · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Yolanda Sanchez · 2005 to 2026
$57.1M
University of New Mexico Center for Metals in Biology and Medicine - equipment supplementP20GM130422 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Eliane El Hayek · 2020 to 2026
$20.4M
FAIR Data Competency and Machine Learning Readiness for Biomedical ScientistsK12GM088021 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI REBECCA S. HARTLEY, Diane Lidke · 2009 to 2026
$16.4M
UNM Metals Exposure and Toxicity Assessment on tribal Lands in the Southwest (METALS) Superfund Research ProgramP42ES025589 · NIEHS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI BOLT, ALICIA M. · 2017 to 2025
$16.4M
Pilot Project CoreP30ES032755 · NIEHS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI BLOSSOM, SARAH J · 2022 to 2025
$5.2M
Project 2: Development of biomarkers of autoimmunity in 3 tribal communities exposed to mixed metal contaminantsP50ES026102 · NIEHS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI GONZALES, MELISSA · 2015 to 2019
$3.6M
NCI NIH HHS P30 CA118100NIEHS NIH HHS P30 ES032755NIEHS NIH HHS P42 ES025589NIEHS NIH HHS P50 ES026102NIGMS NIH HHS K12 GM088021NIGMS NIH HHS P20 GM130422
6 · The paper itself

Abstract

Many human population studies rely on blood samples to test for DNA damage as a biomarker of occupational or environmental exposures, nutrition, disease states or other health concerns. Often sample collection occurs outside of clinical settings in locations lacking immediate access to appropriate technical equipment. We describe a method for the collection of whole blood using dimethyl sulfoxide stabilization followed by cryopreservation that is suitable for samples collected in settings with minimal laboratory equipment. The impact of parameters such as temperature and time of cryopreservation on DNA damage was determined as measured by the comet assay. This method will assist researchers in defining conditions post-phlebotomy to maintain DNA integrity before analysis of DNA damage. We provide evidence that a limited number of freeze thaw cycles are feasible which allows for secondary analysis of samples. Proof of concept is further illustrated through samples collected in remote locations.•Freshly drawn whole blood is aliquoted into DMSO containing cryotubes with slow freeze followed by long term storage in liquid nitrogen which allows repeat sample analysis (1-2 freeze/thaw cycles).•Use of internal quality assurance samples ensures the reliability of DNA damage findings when analysis is conducted at different times over the course of an extended study.

Indexed as

Collection, storage and Alkaline Comet Assay in whole bloodComet assayCryo-preservationDNA damagePopulation studiesWhole blood

Identifiers

PMID40678464
PMCPMC12268840

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.