Evidence map›Paper›PMID 40678411›Full record

ArticleTurkish journal of biology = Turk biyoloji dergisi2025

Proteomic profiling of

Bekir Çöl, Begüm Hazar Çiftçi, Merve Sezer Kürkçü, Esra Dibek

Abstract read
In one paragraph

Article in Turkish journal of biology = Turk biyoloji dergisi, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. The Antimicrobial Peptide CRAMP-34 EradicatesAntibiotics (Basel, Switzerland) · 2026
    Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Bekir ÇölDepartment of Biology, Faculty of Science, Muğla Sıtkı Koçman University, Muğla, Turkiye.ORCID https://orcid.org/0000-0001-8997-4116
Begüm Hazar ÇiftçiDepartment of Biology, Faculty of Science, Muğla Sıtkı Koçman University, Muğla, Turkiye.ORCID https://orcid.org/0000-0001-6195-0091
Merve Sezer KürkçüBiotechnology Research Center, Muğla Sıtkı Koçman University, Muğla, Turkiye.ORCID https://orcid.org/0000-0003-0947-2912
Esra DibekBiotechnology Research Center, Muğla Sıtkı Koçman University, Muğla, Turkiye.ORCID https://orcid.org/0000-0002-8110-5466

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background/aim: Boron is an essential micronutrient for plants and certain bacteria, where it plays critical roles in cellular processes at low concentrations. However, elevated levels of boron-containing compounds, such as boric acid, exhibit antimicrobial toxicity. Although the physiological effects of boric acid on bacteria have been partially characterized, its proteome-wide impacts remain poorly elucidated. This study employs a 2D-PAGE-based proteomic approach to investigate how sublethal boric acid stress alters the cytoplasmic proteome of Materials and methods: Results: Proteomic analysis revealed 12 differentially regulated cytoplasmic proteins under boric acid stress. Upregulated proteins included SodA, KduD, KduI, DeoB, Icd, AceE, RpsM, TdcE, Tuf1, LexA, and LamB, while GatY was downregulated. Functional annotation linked these proteins to oxidative stress defense (SodA), carbohydrate metabolism (KduD, KduI, DeoB), energy production (Icd, AceE), translation (RpsM, Tuf1), and membrane integrity (LamB). RT-PCR validation confirmed transcriptional upregulation of Conclusion: This study provides the first proteomic evidence of

Indexed as

bacterial proteomicsBoron stressKduDmetabolic adaptationSodA

Identifiers

PMID40678411
PMCPMC12266352

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.