Evidence map›Paper›PMID 40673602›Full record

ArticleJournal of phycology2025

Kalymmatonema gen. nov. (Scytonemataceae, Cyanobacteria): A desert soil crust genus previously identified as Scytonema hyalinum, with description of seven species new to science.

Markéta Bohunická, Jeffrey R Johansen, Nicole Pietrasiak, Brian M Jusko, Melaku Mesfin, Itzel Becerra-Absalón

Abstract read
In one paragraph

Article in Journal of phycology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Markéta BohunickáDepartment of Biology, Faculty of Science, University of Hradec Králové, Czech Republic.ORCID https://orcid.org/0000-0001-6964-8014
Jeffrey R JohansenDepartment of Biology, John Carroll University, University Heights, Ohio, USA.ORCID https://orcid.org/0000-0002-0794-9417
Nicole PietrasiakSchool of Life Sciences, University of Nevada-Las Vegas, Las Vegas, Nevada, USA.ORCID https://orcid.org/0000-0003-4636-8006
Brian M JuskoDepartment of Biology, John Carroll University, University Heights, Ohio, USA.ORCID https://orcid.org/0009-0003-8386-8648
Melaku MesfinDepartment of Biology, Cuyahoga Community College, Cleveland, Ohio, USA.ORCID https://orcid.org/0009-0009-2261-6088
Itzel Becerra-AbsalónDepartamento de Biología Comparada, Facultad de Ciencias, Universidad Nacional Autónoma de México, Mexico City, Mexico.ORCID https://orcid.org/0000-0002-4071-541X

Funding

California Institute for Biodiversity 89340Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México PAPIIT Project IN206821Grantová Agentura České Republiky GAČR 22-06374SU.S. Army Construction Engineering Research Laboratory DACA88-95-C-0015U.S. National Science Foundation, Division of Environmental Biology DEB-0842702U.S. National Science Foundation, Division of Environmental Biology DEB-9870201U.S. Navy N62473-21-2-0002
6 · The paper itself

Abstract

Numerous cyanobacterial strains previously identified as Scytonema hyalinum were determined to be phylogenetically distant from the type species of Scytonema, S. hofmannii. Morphological and molecular evidence suggests this distinct clade necessitates placement in a new genus, and we have described Kalymmatonema gen. nov. herein. Kalymmatonema has been demonstrated to exhibit five ribosomal operons, all of which differed in both sequence and secondary structure of conserved helical domains in the 16S-23S internal transcribed spacer rRNA region. Four of these operon copies were highly similar in 16S and 23S rRNA gene sequences, whereas the divergent fifth copy is thought to represent a whole-operon horizontal gene transfer event. Through in-depth analysis, we were able to recognize seven species new to science, the type species K. desertorum sp. nov., K. arcangelii comb. nov., K. chimaera sp. nov., K. ethiopiense sp. nov., K. gypsitolerans sp. nov., K. mateoae sp. nov., and K. oahuense sp. nov. We also created the new combination, K. hyalinum comb. nov., in order to include the original Scytonema hyalinum in this new genus based upon the common morphological feature of a mucilaginous apical cap on the trichomes. Kalymmatonema displays a complex evolution of its ribosomal operons, with evidence not only of horizontal gene transfer but also of internal rearrangements and mobile genetic elements that have transposed the tRNA-containing region of the ITS rRNA region among the four similar operons. Additional investigation of the evolutionary history of this interesting genus will likely lead to a better understanding of the processes shaping ribosomal evolution in cyanobacteria.

Indexed as

CyanobacteriaSoil MicrobiologyDesert ClimatePhylogenyRNA, Ribosomal, 16SRNA, Ribosomal, 23SRNA, Ribosomal, 16SRNA, Ribosomal, 23Sbiological soil crustcyanobacteriaITSKalymmatonemaribosomal operonsScytonemaScytonemataceae

Identifiers

PMID40673602
PMCPMC12547630

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.