Evidence map›Paper›PMID 40671851›Full record

ArticleJournal of the Association of Medical Microbiology and Infectious Disease Canada = Journal officiel de l'Association pour la microbiologie medicale et l'infectiologie Canada2025

Multicentre Experience on the Diagnostic Yield of PCR Testing for Bacterial Pathogens in Sterile Site Infections.

Mohammad Rubayet Hasan, Patrick Tang, Anju Sharma, Padman Jayaratne, Candy Rutherford, Sathyavathi Sundararaju, Mohammed Suleiman, Daniela Leto, Deborah Yamamura, Andres Perez-Lopez and 1 more

Abstract read
In one paragraph

Article in Journal of the Association of Medical Microbiology and Infectious Disease Canada = Journal officiel de l'Association pour la microbiologie medicale et l'infectiologie Canada, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mohammad Rubayet HasanHamilton Regional Laboratory Medicine Program, Hamilton, Ontario, Canada.
Patrick TangDivision of Microbiology, Sidra Medicine, Doha, Qatar.
Anju SharmaDivision of Microbiology, Sidra Medicine, Doha, Qatar.
Padman JayaratneHamilton Regional Laboratory Medicine Program, Hamilton, Ontario, Canada.
Candy RutherfordHamilton Regional Laboratory Medicine Program, Hamilton, Ontario, Canada.
Sathyavathi SundararajuDivision of Microbiology, Sidra Medicine, Doha, Qatar.
Mohammed SuleimanDivision of Microbiology, Sidra Medicine, Doha, Qatar.
Daniela LetoHamilton Regional Laboratory Medicine Program, Hamilton, Ontario, Canada.
Deborah YamamuraHamilton Regional Laboratory Medicine Program, Hamilton, Ontario, Canada.
Andres Perez-LopezDivision of Microbiology, Sidra Medicine, Doha, Qatar.
Marek SmiejaHamilton Regional Laboratory Medicine Program, Hamilton, Ontario, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Infections in sterile body sites are serious despite their low incidence. Accurate diagnosis is crucial for effective antimicrobial management. This study assessed the diagnostic yield of multiplex polymerase chain reaction (PCR) in identifying bacterial pathogens in sterile site specimens other than blood and cerebrospinal fluid. Methods: Bacterial pathogen PCR panels were independently developed and validated by the laboratories at the Hamilton Regional Laboratory Medicine Program (HRLMP) in Canada and Sidra Medicine in Qatar. Retrospective culture and PCR data for the periods of July 2022 to November 2023 and September 2021 to February 2023 were extracted from the laboratory information systems of HRLMP and Sidra Medicine, respectively. The diagnostic yield of PCR between different groups was compared using the McNemar test or chi-square test. Results: Validation studies showed 100% sensitivity for PCR assays in both laboratories, with varying specificity due to the detection of additional pathogens by PCR. Combining post-implementation data from both laboratories, 38.7% of 512 specimens were PCR-positive for target organisms, compared to 6.1% by culture. While the diagnostic yield of PCR was significantly higher than that of culture in both adult and paediatric populations ( Conclusion: This study supports using PCR alongside culture to enhance pathogen detection and improve the management of sterile site infections, particularly in paediatric patients.

Indexed as

culturediagnosisPCRpediatric patientspleural fluidsterile site infections

Identifiers

PMID40671851
PMCPMC12258650

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.