Evidence map›Paper›PMID 40671593›Full record

ArticlePlant physiology2025

VULGARE ROW-TYPE SIX 5 binds to the promoter of tillering and floral homeotic genes to regulate their expression.

Ton Winkelmolen, Pierangela Colleoni, Matthew J Moscou, Parastoo Hoseinzadeh, Klaus Oldach, Ralf Christian Schmidt, Richard G H Immink, G Wilma van Esse

Abstract read
In one paragraph

Article in Plant physiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Fine-mapping theMolecular breeding : new strategies in plant improvement · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ton WinkelmolenLaboratory of Molecular Biology, Wageningen University and Research, Wageningen 6708 PB, The Netherlands.ORCID 0009-0001-1178-3501
Pierangela ColleoniLaboratory of Molecular Biology, Wageningen University and Research, Wageningen 6708 PB, The Netherlands.ORCID 0009-0003-8061-2567
Matthew J MoscouThe Sainsbury Laboratory, Norwich Research Park, Norwich NR47 UH, UK.ORCID 0000-0003-2098-6818
Parastoo HoseinzadehKWS SAAT SE & Co. KGaA, 37574 Einbeck, Germany.ORCID 0000-0001-5189-2158
Klaus OldachKWS SAAT SE & Co. KGaA, 37574 Einbeck, Germany.ORCID 0000-0002-7114-2650
Ralf Christian SchmidtBASF Belgium Coordination Center CommV, Technologiepark 101, 9052 Gent Zwijnaarde, Belgium.ORCID 0000-0003-0591-180X
Richard G H ImminkLaboratory of Molecular Biology, Wageningen University and Research, Wageningen 6708 PB, The Netherlands.ORCID 0000-0002-0182-4138
G Wilma van EsseLaboratory of Molecular Biology, Wageningen University and Research, Wageningen 6708 PB, The Netherlands.ORCID 0000-0001-5012-2346

Funding

Gatsby Charitable FoundationNWO-VIDI 18366UKRI-BBSRC-ISP BB/P012574/1UKRI-BBSRC-ISP BBS/E/J/000PR9795United States Department of Agriculture-Agricultural Research Service CRIS #5062-21220-025-000D
6 · The paper itself

Abstract

Variation in shoot architecture, or tillering, is an important adaptive trait targeted during the domestication of crops. A well-known regulatory factor in shoot architecture is TEOSINTE BRANCHED 1 (TB1). TB1 and its orthologs have a conserved function in integrating environmental signals to regulate axillary branching or tillering in cereals. The barley (Hordeum vulgare) ortholog of TB1, VULGARE ROW-TYPE SIX 5 (VRS5), regulates tillering and is involved in regulating row-type by inhibiting lateral spikelet development. These discoveries predominantly come from genetic studies; however, how VRS5 regulates these processes on a molecular level remains largely unknown. By combining transcriptome analysis between the vrs5 mutant and the wild-type at different developmental stages and DAP-sequencing to locate the genome-wide DNA binding sites of VRS5, we identified bona fide targets of VRS5. We found that VRS5 targets abscisic acid-related genes, potentially to inhibit tillering in a conserved way. Later in inflorescence development, VRS5 also targets row-type gene VRS1 and several known floral development genes, such as MIKCc-type MADS-box genes. This study identifies several genes for mutational analysis, representing a selection of bona fide targets that will contribute to a deeper understanding of the VRS5 network and its role in shaping barley development.

Indexed as

FlowersGene Expression Regulation, PlantGenes, HomeoboxHordeumPlant ProteinsPromoter Regions, GeneticGenes, PlantPlant Proteins

Identifiers

PMID40671593
PMCPMC12360928

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.