Evidence map›Paper›PMID 40670965›Full record

ArticleBMC genomics2025

Effects of dietary protein levels on genes related to subcutaneous fat deposition and lipid metabolism in Tibetan sheep.

Xianhua Zhang, Zhenling Wu, Jiacheng Gan, Rengeerli Sa, Wei Gao, Yu Zhang, Shengzhen Hou, Linsheng Gui

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xianhua Zhang *College of Agriculture and Animal Husbandry, Qinghai University, Xining, Qinghai, China.
Zhenling Wu *College of Agriculture and Animal Husbandry, Qinghai University, Xining, Qinghai, China.
Jiacheng GanCollege of Agriculture and Animal Husbandry, Qinghai University, Xining, Qinghai, China.
Rengeerli SaCollege of Agriculture and Animal Husbandry, Qinghai University, Xining, Qinghai, China.
Wei GaoCollege of Agriculture and Animal Husbandry, Qinghai University, Xining, Qinghai, China.
Yu ZhangCollege of Agriculture and Animal Husbandry, Qinghai University, Xining, Qinghai, China.
Shengzhen HouCollege of Agriculture and Animal Husbandry, Qinghai University, Xining, Qinghai, China.
Linsheng GuiCollege of Agriculture and Animal Husbandry, Qinghai University, Xining, Qinghai, China. Gls514188@126.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Subcutaneous fat deposition significantly influences animal growth, carcass quality, and meat characteristics. This study investigates the effects of varying dietary protein levels on backfat thickness, antioxidant capacity, fatty acid composition, differentially expressed genes (DEGs), and lipid molecules in Tibetan sheep. Sixty lambs were randomly assigned to two groups: a high-protein group (13.03% protein) and a low-protein group (11.58% protein), with each group containing 30 lambs (3 replicates per group, 10 lambs per replicate). Results showed that the low-protein group had significantly smaller fat cell diameters than the high-protein group (P < 0.05, as determined by H&E staining). Additionally, the low-protein group exhibited significantly higher activities of GSH-Px and SOD, and lower MDA content compared to the high-protein group. Gas chromatography identified 33 fatty acids in the fat samples, with oleic, stearic, and palmitic acids being most abundant. The LP group had significantly lower C22:0 and higher C20:2, C20:3n6, C20:4n6, and C20:3n3 levels than the HP group (P < 0.05). Transcriptomic analysis revealed 70 DEGs, of which 33 were upregulated and 37 were downregulated. KEGG analysis showed DEGs were enriched in 5 lipid metabolism pathways, including osteoclast differentiation, IL-17 signaling, and fluid shear stress/atherosclerosis. PPI analysis identified key lipid metabolism genes (FOS, FOSB, JUN, NR4A1, JUNB, PPARG). qRT-PCR validated RNA-Seq data accuracy. Lipid analysis detected 39 lipid classes and 2,605 lipid species, such as 856 TGs, 335 DGs, 279 Cer, 226 PCs, and 205 PEs. The LP group had higher DG and TG proportions, with significant increases in DG (40:4e), DG (32:1e), DG (34:4e), DG (20:5_18:2), and TG (16:18:1_18:3) levels. Correlation analysis showed that NR4A1, FOS, JUN, and JUNB positively correlated with catalase (CAT) activity, while FOS, JUN, and JUNB were linked to fatty acid metabolism and adipocyte development. PPARG positively correlated with PUFAs (C20:2, C20:3n6, C20:4n6, C20:3n3, and C20:5n3). Lipid differential molecules (DG (40:4e) and DG (20:5_18:2)) positively correlated with CAT activity, and DG (32:1e) positively correlated with C22:0. Lipid differential molecules including DG (40:4e), DG (32:1e), DG (34:4e), DG (20:5_18:2), and TG (16:18_18:3) negatively correlated with adipocyte diameter. In conclusion, a diet with 11.58% protein regulates lipid-related gene expression, enhances antioxidant capacity in subcutaneous fat, and increases unsaturated fatty acid content.

Indexed as

Lipid MetabolismSubcutaneous FatAnimal FeedAnimalsDietFatty AcidsGene Expression ProfilingGene Expression RegulationSheepTibetTranscriptomeFatty AcidsAbsolute quantitative lipidomicsFatty acidSubcutaneous fatTibetan sheepTranscriptomics

Identifiers

PMID40670965
PMCPMC12265348

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.