Evidence map›Paper›PMID 40667151›Full record

ArticlebioRxiv : the preprint server for biology2025

Compression injury regulates astrocyte morphology, metabolic function, and extracellular matrix modification in a 3D hydrogel.

Ana N Strat, Suhani Patel, Minh-Tri Ho Thanh, Alexander Kirschner, Souvik Ghosh, Michael P Geiss, Arunkumar Venkatesan, Audrey M Bernstein, Mariano Viapiano, Yutao Liu and 3 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ana N StratDepartment of Ophthalmology & Visual Sciences, SUNY Upstate Medical University, Syracuse, NY 13210, USA.ORCID 0000-0001-6499-1518
Suhani PatelDepartment of Ophthalmology & Visual Sciences, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Minh-Tri Ho ThanhBioInspired Institute, Syracuse University, Syracuse, NY 13244, USA.ORCID 0000-0002-9380-0191
Alexander KirschnerDepartment of Ophthalmology & Visual Sciences, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Souvik GhoshDepartment of Ophthalmology & Visual Sciences, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Michael P GeissBioInspired Institute, Syracuse University, Syracuse, NY 13244, USA.
Arunkumar VenkatesanDepartment of Ophthalmology & Visual Sciences, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Audrey M BernsteinDepartment of Ophthalmology & Visual Sciences, SUNY Upstate Medical University, Syracuse, NY 13210, USA.ORCID 0000-0002-2537-2594
Mariano ViapianoDepartment of Neuroscience and Physiology, SUNY Upstate Medical University, Syracuse, NY 13210, USA.ORCID 0000-0002-8756-388X
Yutao LiuDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA 30912, USA.ORCID 0000-0003-2870-4504
Alison E PattesonBioInspired Institute, Syracuse University, Syracuse, NY 13244, USA.ORCID 0000-0002-4004-1734
Samuel HerbergDepartment of Ophthalmology & Visual Sciences, SUNY Upstate Medical University, Syracuse, NY 13210, USA.ORCID 0000-0001-7196-2010
Preethi S GanapathyDepartment of Ophthalmology & Visual Sciences, SUNY Upstate Medical University, Syracuse, NY 13210, USA.ORCID 0000-0001-5736-7485

Funding

Module 3: Gene Expression/ProteomicsP30EY031631 · NEI · AUGUSTA UNIVERSITY · PI Xingjun Fan · 2020 to 2026
$3.6M
Gene Discovery in Familial KeratoconusR01EY023242 · NEI · DUKE UNIVERSITY · PI LIU, YUTAO · 2013 to 2023
$3.4M
THE UBIQUITIN PATHWAY IN CORNEAL SCARRINGR01EY024942 · NEI · UPSTATE MEDICAL UNIVERSITY · PI AUDREY M BERNSTEIN · 2015 to 2026
$3.1M
Role of vimentin in mammalian cell motilityR35GM142963 · NIGMS · SYRACUSE UNIVERSITY · PI PATTESON, ALISON ELISE · 2021 to 2025
$2.1M
Role of cellular memory in glaucoma.R01EY034096 · NEI · UPSTATE MEDICAL UNIVERSITY · PI Samuel Herberg · 2022 to 2026
$2.0M
A single dose anti-scarring therapeutic for the corneaR44EY035188 · NEI · DUB THERAPEUTICS INC. · PI WILLIAMS, TERE M. · 2023 to 2024
$1.8M
Estrogen and its Receptor in Intraocular Pressure RegulationR01EY032960 · NEI · MAYO CLINIC ROCHESTER · PI Yutao Liu · 2023 to 2026
$1.6M
Cellular Dysfunction in Exfoliation GlaucomaR01EY030567 · NEI · UPSTATE MEDICAL UNIVERSITY · PI BERNSTEIN, AUDREY M, WOLOSIN, JOSE MARIO · 2020 to 2023
$1.6M
Investigating mechanosensation in the glaucomatous optic nerve headK08EY031755 · NEI · UPSTATE MEDICAL UNIVERSITY · PI GANAPATHY, PREETHI · 2021 to 2025
$1.1M
Optic nerve head astrocyte sensitivity to glaucomatous insultR01EY036880 · NEI · UPSTATE MEDICAL UNIVERSITY · PI Preethi Ganapathy · 2025 to 2026
$777k
Long Noncoding RNA lncLOXL1 and Exfoliation Syndrome.R21EY028671 · NEI · AUGUSTA UNIVERSITY · PI LIU, YUTAO · 2018 to 2019
$467k
Targeting scaffolding proteins to disrupt radioresistance in glioblastomaR21NS139236 · NINDS · UPSTATE MEDICAL UNIVERSITY · PI VIAPIANO, MARIANO SEBASTIAN · 2024 to 2024
$448k
BLRD VA I01 BX005360NEI NIH HHS K08 EY031755NEI NIH HHS P30 EY031631NEI NIH HHS R01 EY023242NEI NIH HHS R01 EY024942NEI NIH HHS R01 EY030567NEI NIH HHS R01 EY032960NEI NIH HHS R01 EY034096NEI NIH HHS R01 EY036880NEI NIH HHS R21 EY028671NEI NIH HHS R21 EY033961NEI NIH HHS R21 EY036189NEI NIH HHS R21 EY036198NEI NIH HHS R44 EY035188NIGMS NIH HHS R35 GM142963NINDS NIH HHS R21 NS139236
6 · The paper itself

Abstract

In glaucoma, the optic nerve head (ONH) is exposed to increased biomechanical strain, impacting the resident astrocytes that maintain neural homeostasis. During disease progression astrocytes exhibit morphologic and metabolic shifts; however, the specific impact of glaucoma-related biomechanical strains on astrocyte behavior remains poorly understood. To address this, we used our previously established 3D cell-encapsulated extracellular matrix (ECM) hydrogel to investigate ONH astrocyte cellular and transcriptomic responses to varying biomechanical strain levels over time. Murine ONH astrocyte were encapsulated within an ECM hydrogel made from photocrosslinkable collagen type I and hyaluronic acid, and subjected to 0, 3, or 10% cyclic compression for 4h and 24h. We found significant restructuring of cytoskeletal morphology, metabolic dysregulation, and astrocyte-mediated ECM modulation that were strain-, duration- and hydrogel subregion-dependent. These phenotypic alterations were associated with diverse transcriptional changes in genes related to cell cycle and morphology, inflammation, metabolism and matrix remodeling that were driven by compressive strain intensity and duration. Our work reveals the direct role of compressive strain in eliciting a complex astrocyte response, supports targeting mechanosensation to prevent these pathologic astrocyte responses, and establishes ECM-based hydrogels as a platform to test mechanisms driving astrocyte mechanodysfunction. Altogether, our study offers new insights into astrocyte responses to biomechanical insult and demonstrates the use of a tunable 3D ECM hydrogel for future mechanistic studies of neurodegeneration.

Indexed as

biomechanical strainECM hydrogelsglaucomamechanobiologymorphologyoptic nerve headtranscriptomics

Identifiers

PMID40667151
PMCPMC12262324

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.