Evidence map›Paper›PMID 40665438›Full record

ArticleBMC research notes2025

Host transcriptome profiling for resistance against lumpy skin disease (LSD).

Mohammad Hossein Banabazi, Steven Van Borm, Tomas Klingström, Adnan Niazi, Kris De Clercq, Laurent Mostin, Andy Haegeman, Dirk Jan de Koning

Abstract read
In one paragraph

Article in BMC research notes, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mohammad Hossein BanabaziDepartment of Animal Biosciences, Swedish University of Agricultural Sciences, Box 7023, Uppsala, 750 07, Sweden.
Steven Van BormSciensano, Rue Juliette Wytsmanstraat 14, Brussels, 1050, Belgium.
Tomas KlingströmDepartment of Animal Biosciences, Swedish University of Agricultural Sciences, Box 7023, Uppsala, 750 07, Sweden.
Adnan NiaziDepartment of Animal Biosciences, Swedish University of Agricultural Sciences, Box 7023, Uppsala, 750 07, Sweden.
Kris De ClercqSciensano, Rue Juliette Wytsmanstraat 14, Brussels, 1050, Belgium.
Laurent MostinSciensano, Rue Juliette Wytsmanstraat 14, Brussels, 1050, Belgium.
Andy HaegemanSciensano, Rue Juliette Wytsmanstraat 14, Brussels, 1050, Belgium.
Dirk Jan de KoningDepartment of Animal Biosciences, Swedish University of Agricultural Sciences, Box 7023, Uppsala, 750 07, Sweden. dj.de-koning@slu.se.ORCID http://orcid.org/0000-0001-6343-8155

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveLumpy skin disease (LSD) is an acute or subacute systemic viral disease of cattle that shows variation in the response of cattle to LSD virus infection. To better understand the mechanisms underlying this response diversity in field studies and under carefully controlled artificial infections, we studied the differentially expressed genes (DEGs) between two resilient versus three susceptible Holstein bulls before an infection challenge and three time points after that.

resultsThe host transcriptome profiling revealed that IL1RAP gene expression could be a potential determinant in distinguishing between resilient and susceptible cattle (padj < 0.05). It was significantly shifted from up-regulated prior to infection to down-regulated three days post-infection in the LSD-resilient cattle. Its expression remained up-regulated among the susceptible cattle post-infection compared to pre-infection. The results showed that seven days post-infection may be a critical time point for LSD infection. The Gene Ontology (GO) and KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway enrichment test showed a few enriched GO terms and pathways relevant to the LSD and the involvement of the IL1RAP gene. This pilot study, with limited statistical power, is the first to investigate bovine gene expression profiling in response to LSDV.

Indexed as

Disease ResistanceGene Expression ProfilingLumpy Skin DiseaseLumpy skin disease virusTranscriptomeAnimalsCattleGene OntologyInterleukin 1 Receptor Antagonist ProteinMalePilot ProjectsInterleukin 1 Receptor Antagonist ProteinCattleDifferentially expressed genes (DEG)Host determinantsIL1RAP geneLumpy skin disease (LSD)Transcriptome profiling

Identifiers

PMID40665438
PMCPMC12265363

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.