Evidence map›Paper›PMID 40663337›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

The Construction of dsDNA-Based AND-Gate (DBAG) Peptide Library in Mammalian Cells.

Kaili Zhang, Yi Wang, Yifan Li, Shuze Jiang, Yongzi Chen, Min Chen, Weijun Su, Liren Liu, Shuai Li

Abstract read
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kaili ZhangDepartment of Molecular Pharmacology, Tianjin Medical University Cancer Institute and Hospital; National Clinical Research Center for Cancer; Key Laboratory of Cancer Prevention and Therapy, Tianjin, China.
Yi WangDepartment of Molecular Pharmacology, Tianjin Medical University Cancer Institute and Hospital; National Clinical Research Center for Cancer; Key Laboratory of Cancer Prevention and Therapy, Tianjin, China.
Yifan LiDepartment of Molecular Pharmacology, Tianjin Medical University Cancer Institute and Hospital; National Clinical Research Center for Cancer; Key Laboratory of Cancer Prevention and Therapy, Tianjin, China.
Shuze JiangDepartment of Molecular Pharmacology, Tianjin Medical University Cancer Institute and Hospital; National Clinical Research Center for Cancer; Key Laboratory of Cancer Prevention and Therapy, Tianjin, China.
Yongzi ChenTianjin's Clinical Research Center for Cancer, Tianjin, China.
Min ChenDepartment of Molecular Pharmacology, Tianjin Medical University Cancer Institute and Hospital; National Clinical Research Center for Cancer; Key Laboratory of Cancer Prevention and Therapy, Tianjin, China.
Weijun SuSchool of Medicine, Nankai University, Tianjin, China.
Liren LiuDepartment of Molecular Pharmacology, Tianjin Medical University Cancer Institute and Hospital; National Clinical Research Center for Cancer; Key Laboratory of Cancer Prevention and Therapy, Tianjin, China. liuliren@tmu.edu.cn.
Shuai LiDepartment of Molecular Pharmacology, Tianjin Medical University Cancer Institute and Hospital; National Clinical Research Center for Cancer; Key Laboratory of Cancer Prevention and Therapy, Tianjin, China. shuaili@tmu.edu.cn.ORCID https://orcid.org/0000-0001-5079-4425

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The construction of DNA-encoded peptide libraries in mammalian cells is an evolving field that combines the advantages of mammalian cell expression systems with the vast diversity of DNA-encoded libraries. This enables high-throughput screening and identification of functional peptides in a mammalian cell context, aiding in the elucidation of disease-related proteins and the development of novel peptide drugs. We have developed a strategy for constructing dsDNA-based AND-gate (DBAG), which utilizes dsDNAs with NNK degenerate codons at the ends to implement AND-gate genetic circuits and generate peptide libraries in mammalian cells. We provide a detailed description of the library preparation, transfection, and analysis methods.

Indexed as

DNAPeptide LibraryAnimalsCodonHEK293 CellsHumansPeptidesTransfectionCodonDNAPeptide LibraryPeptidesAND-gate genetic circuitDouble-stranded DNA (dsDNA)High-throughput sequencingMammalian cellNNK degenerate codonPeptide libraryTransfection

Identifiers

PMID40663337

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.