Evidence map›Paper›PMID 40662817›Full record

ArticleBioinformatics (Oxford, England)2025

An educator framework for organizing Wikipedia editathons for computational biology.

Nelly Sélem-Mojica, Tiago Lubiana, Toni Hermoso Pulido, Aarón Gallego-Crespo, Tülay Karakulak, Megha Hegde, Nicolas C Näpflin, Audra Anjum, Pradeep Eranti, Dan DeBlasio and 8 more

Abstract read
In one paragraph

Article in Bioinformatics (Oxford, England), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Nelly Sélem-MojicaCentro de Ciencias Matemáticas, Universidad Nacional Autónoma de México, Morelia 58089, México.ORCID 0000-0003-1697-3862
Tiago LubianaDepartment of Genetics and Evolutionary Biology, Institute of Biosciences, University of São Paulo, São Paulo 05508-090, Brazil.ORCID 0000-0003-2473-2313
Toni Hermoso PulidoCentre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona 08003, Spain.ORCID 0000-0003-2016-6465
Aarón Gallego-CrespoDepartment of Hematology and Oncology, University Medical Center of the Johannes Gutenberg University, Mainz 55131, Germany.ORCID 0009-0003-9758-6633
Tülay KarakulakDepartment of Molecular Life Sciences and Swiss Institute of Bioinformatics, University of Zurich, Zurich 8057, Switzerland.ORCID 0000-0002-4644-2774
Megha HegdeSchool of Computing and Mathematics, Faculty of Engineering, Computing, and Environment, Kingston University, London, KT1 2EE, United Kingdom.ORCID 0009-0008-2523-4619
Nicolas C NäpflinDepartment of Molecular Life Sciences and Swiss Institute of Bioinformatics, University of Zurich, Zurich 8057, Switzerland.ORCID 0000-0001-6845-7400
Audra AnjumOffice of Instructional Design, Ohio University, Athens, OH, 45701, United States.ORCID 0009-0004-8774-9141
Pradeep ErantiUniversité Paris Cité, Inserm, T3S, Paris 75006, France.ORCID 0000-0002-3060-3967
Dan DeBlasioRay and Stephanie Lane Computational Biology Department, Carnegie Mellon University, Pittsburgh, PA, 15213, United States.ORCID 0000-0003-4110-4431
Jorge Noé García-ChávezLaboratory of Agrogenomics Sciences, Universidad Nacional Autónoma de México, León 37684, México.ORCID 0000-0003-4482-1575
Cynthia Paola Rangel-ChávezBiochemical Engineering Division, Tecnológico Nacional de México/Instituto Tecnológico Superior de de Irapuato, Guanajuato 36821, México.
Divanery Rodriguez-GomezBiochemical Engineering Division, Tecnológico Nacional de México/Instituto Tecnológico Superior de de Irapuato, Guanajuato 36821, México.ORCID 0000-0002-4457-5338
Varinia López-RamírezBiochemical Engineering Division, Tecnológico Nacional de México/Instituto Tecnológico Superior de de Irapuato, Guanajuato 36821, México.
Juan Vázquez-MartínezChemical Engineering Division, Tecnológico Nacional de México/Instituto Tecnológico Superior de Irapuato, Guanajuato, 36821, México.ORCID 0000-0002-3037-1457
Lonnie R WelchSchool of Electrical Engineering and Computer Science, Ohio University, Athens, OH, 45701, United States.
Alastair M KilpatrickCentre for Regenerative Medicine, Institute for Regeneration and Repair, The University of Edinburgh, Edinburgh, EH16 4UU, United Kingdom.ORCID 0000-0002-4795-8799
Farzana RahmanSchool of Computing and Mathematics, Faculty of Engineering, Computing, and Environment, Kingston University, London, KT1 2EE, United Kingdom.ORCID 0000-0002-4785-5845

Funding

Environment, Kingston UniversityFaculty of Engineering, Computing
6 · The paper itself

Abstract

motivationWikipedia is a vital open educational resource in computational biology; however, a significant knowledge gap exists between English and non-English Wikipedias. Reducing this knowledge gap via intensive editing events, or "editathons," would be beneficial in reducing language barriers that disadvantage learners whose native language is not English. Results: We present a framework to guide educators in organizing editathons for learners to improve and create relevant Wikipedia articles. As a case study, we present the results of an editathon held at the 2024 ISCB Latin America conference, in which ten new articles were created for the Spanish-language edition of Wikipedia. We also present a web tool, "compbio-on-wiki," which identifies relevant English Wikipedia articles missing in other languages. We demonstrate the value of editathons to expand the accessibility and visibility of computational biology content in multiple languages. AVAILABILITY AND IMPLEMENTATION: Source code for the compbio-on-wiki Toolforge site is available at: https://github.com/lubianat/compbio-on-wiki.

Indexed as

Computational BiologyEncyclopedias as TopicInternetSoftwareHumansLanguage

Identifiers

PMID40662817
PMCPMC12261409

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.