Evidence map›Paper›PMID 40661905›Full record

ArticleEcology and evolution2025

Comparative Analysis of Convergent Jellyfish Eyes Reveals Extensive Differences in Expression of Vision-Related Genes.

Natasha Picciani, Cory A Berger, Sofie Nielsen, Jacob Musser, Adam Philip Oel, Marina I Stoilova, Detlev Arendt, Anders Garm, Todd H Oakley

Abstract read
In one paragraph

Article in Ecology and evolution, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Adaptive molecular convergence is pervasive across deep time and largely decoupled from phenotypic convergence.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Natasha PiccianiDepartment of Ecology, Evolution, and Marine Biology University of California Santa Barbara California USA.
Cory A BergerDepartment of Ecology, Evolution, and Marine Biology University of California Santa Barbara California USA.ORCID https://orcid.org/0000-0002-6003-1955
Sofie NielsenMarine Biological Section University of Copenhagen Copenhagen Denmark.
Jacob MusserDevelopmental Biology Unit European Molecular Biology Laboratory Heidelberg Germany.
Adam Philip OelDevelopmental Biology Unit European Molecular Biology Laboratory Heidelberg Germany.
Marina I StoilovaDepartment of Ecology, Evolution, and Marine Biology University of California Santa Barbara California USA.
Detlev ArendtDevelopmental Biology Unit European Molecular Biology Laboratory Heidelberg Germany.
Anders GarmMarine Biological Section University of Copenhagen Copenhagen Denmark.
Todd H OakleyDepartment of Ecology, Evolution, and Marine Biology University of California Santa Barbara California USA.ORCID https://orcid.org/0000-0002-4478-915X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quantifying gene expression across convergent origins of traits clarifies the degree to which those traits arise from shared versus distinct genetic programs, revealing how gene reuse relates to the repeatability of evolution. Eyes are important traits that evolved in many distantly related lineages, including at least nine times within cnidarians. Here, we investigate gene expression in eye-bearing and nonvisual tissues from three cnidarian species representing long-diverged lineages where eyes evolved convergently (Cubozoa, Scyphozoa, and Hydrozoa). We find gene expression in eye-bearing tissues to be mostly lineage-specific, with only a small proportion of genes having convergent expression across species. Nevertheless, all species express homologs of deeply conserved vision-related genes known from Bilateria, which likely reflects deep homology (parallel evolution across vast phylogenetic distances) of a metazoan phototransduction toolkit. A gene tree analysis of opsins-the prototypical animal photosensors-shows that convergent eyes recruited different opsin paralogs, with the potential exception of an opsin ortholog shared between scyphozoan and cubozoan eyes. Our results suggest that eyes have mostly lineage-specific patterns of gene expression, yet some key phototransduction components are repeatedly recruited across multiple independent eye origins in Medusozoa.

Identifiers

PMID40661905
PMCPMC12259307

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.