Evidence map›Paper›PMID 40661479›Full record

ArticlebioRxiv : the preprint server for biology2025

Primary tumor microbiomes predict distant metastasis of colorectal cancer.

Bishal Parajuli, Vishal Midya, Ryan Kiddle, Nicola De Jager, Shoshannah Eggers, Daniel Spakowicz, Rebecca Hoyd, Bodour Salhia, Carlos H F Chan, Michelle L Churchman and 16 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors.

Bishal Parajuli
Vishal Midya
Ryan Kiddle
Nicola De Jager
Shoshannah Eggers
Rebecca Hoyd
Bodour Salhia
Carlos H F Chan
Michelle L Churchman
Robert J Rounbehler
Song Yao
Melanie R Rutkowski
Ahmad A Tarhini
Dinesh Pal Mudaranthakam
Ashiq Masood
Therese J Bocklage
Robert W Lentz
Hassan Hatoum
Mmadili N Ilozumba
Sheetal Hardikar
Cornelia M Ulrich
June L Round
Gregory Riedlinger
Craig D Shriver

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metastasis causes most cancer-related deaths in colorectal carcinoma (CRC), and microbiome markers may have prognostic value. We hypothesized that primary tumor microbiomes predict distant metastases. We analyzed 5-year metastasis-free survival (MFS) in a retrospective cohort of 900 ORIEN CRC tumor microbiomes (RNAseq). ORIEN findings were validated on an independent cohort using 16S rDNA sequencing and pathobiont-specific qPCR. Microbiome alpha diversity was higher in primary tumors than metastases and positively correlated with metastasis risk. Microbiome beta diversity distinguished primary vs. metastasis and predicted 5-year MFS. High primary tumor abundance of

Identifiers

PMID40661479
PMCPMC12258887

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.