Evidence map›Paper›PMID 40659687›Full record

ArticleScientific data2025

Metagenomic and Transcriptomic Datasets of Plateau Brown Frogs (Rana kukunoris) from the Helan Mountains.

Nan Zhang, Yao Zhao, Zhirong Zhang, Meiling Zhan, Xuyang Zhao, Yi Zhang, Jingyu Sun, Yuxuan Zhang, Liwei Teng, Zhensheng Liu

Erratum issuedAbstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Nan ZhangCollege of Wildlife and Protected Area, Northeast Forestry University, Harbin, 150040, China.
Yao ZhaoCollege of Wildlife and Protected Area, Northeast Forestry University, Harbin, 150040, China.
Zhirong ZhangCollege of Wildlife and Protected Area, Northeast Forestry University, Harbin, 150040, China.
Meiling ZhanCollege of Wildlife and Protected Area, Northeast Forestry University, Harbin, 150040, China.
Xuyang ZhaoCollege of Wildlife and Protected Area, Northeast Forestry University, Harbin, 150040, China.
Yi ZhangCollege of Wildlife and Protected Area, Northeast Forestry University, Harbin, 150040, China.
Jingyu SunCollege of Wildlife and Protected Area, Northeast Forestry University, Harbin, 150040, China.
Yuxuan ZhangCollege of Wildlife and Protected Area, Northeast Forestry University, Harbin, 150040, China.
Liwei TengCollege of Wildlife and Protected Area, Northeast Forestry University, Harbin, 150040, China. tenglw1975@163.com.
Zhensheng LiuCollege of Wildlife and Protected Area, Northeast Forestry University, Harbin, 150040, China. zhenshengliu@163.com.ORCID 0000-0001-6367-6073

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32071649
6 · The paper itself

Abstract

Global climate change has become a primary driving factor behind the biodiversity crisis in amphibians, making it crucial to understand how climate change affects species and their potential responses. The plateau brown frog (Rana kukunoris) is often regarded as an ideal ecological indicator species, yet research on its environmental adaptation mechanisms based on transcriptomic and microbiomic studies remains limited. Therefore, this study investigates the adaptation strategies of the plateau brown frog to environmental changes, providing extensive transcriptomic and the first comprehensive metagenomic dataset from two distinctly different environmental regions (eastern and western slopes of the Helan Mountains). We gathered transcriptomic data from three tissues (blood, liver, and muscle), resulting in 294,962 unigenes and 570,192 transcripts. Metagenomic sequencing identified major bacterial groups, including Firmicutes, Proteobacteria, Bacteroidetes, Spirochetes, and Actinobacteria. In summary, the results of this study can be used to further explore the associations among microbiota, host, and environment, which are crucial for comprehending the mechanisms of environmental adaptation in this species and contributing to the conservation of amphibian biodiversity.

Indexed as

MetagenomeRanidaeTranscriptomeAdaptation, PhysiologicalAnimalsChinaClimate ChangeMetagenomicsMicrobiota

Identifiers

PMID40659687
PMCPMC12259888

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.